ABCC : Applications Web Page

Applications Web Page Welcome to the ABCC Accessible Application Web Page.

From this page, you can get information about our scientific applications and databases. To get more information about any topic, or to run an application, click on any of the menu items on the left-hand side. Program with a tag "Run" is runnable. This site continues to grow, so come back often to check out the many accessible applications available here at the Advanced Biomedical Computing Center (ABCC).

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Utilities
GetSequence
GetSequence program was designed to extract sequence(s) from the ABCC sequence databases. Either GI(s) or Accession(s) number can be input.
Website: Click Here

Chopper
Chopper was desined to break a sequence(sequence id based, or sequence based) into chunks of 1000 bp by default.
Website: Click Here

GetDoubleDNA
GetDoubleDNA program was designed to generate double chain DNA sequence, the input is a single DNA sequence in fasta format.
Website: Click Here

Readseq
Readseq is a sequence conversion program written by Don Gilbert (Bioinformatics group, Biology Department & Cntr. Genomics & Bioinformatics, Indiana University, Bloomington, Indiana). It reads and writes nucleic acid/protein sequences in various formats. Data input files may have multiple sequences that need to be converted to a given format. The program takes on the task of guessing the format of the input sequence and converting it to a format chosen by the user from a list provided.
Website: Click Here

Frag_pI
A program to calculate molecular weight, isoelectric point and hydropathy index of peptide fragments.
Website: Click Here

reverseSeq
reverseSeq was designed to reverse a fasta format DNA sequence
Website: Click Here

pI_plot
A program which calculate pI/hydrophobic/weight ... and make a plot of pI/hydrophobic.
Website: Click Here