ABCC : Application's document Page

ESPript At ABCC
Name: 
ESPript
Version(s): 
1.99
Category: 
Molecular Visualization; Alignment, Sequence Analysis, Bioinformatics
Author(s)/Vendor(s): 
Patrice Gouet and Frédéric Metoz
Program Description: 
ESPript generates a PostScript file of aligned sequences with
graphical enhancements. Its main input is an ascii file of
pre-aligned sequences. Optional files allow further rendering. The
program calculates a similarity score for each residue of the
aligned sequences. 

The output shows: 
    Secondary Structures 
    Aligned sequences 
    Similarities 
    Consensus 
    Accessibility 
    Hydropathy 
    User-supplied markers 
    Intermolecular contacts 

In addition, similarity score can be written in the bfactor column
of a pdb file, to enable direct display of highly conserved areas.
Computer platform(s): 
SGI
Location: 
/usr/local/fbscapp/ESPript/
Access: 
set path = ($path /usr/local/fbscapp/ESPript/bin)
ESPript
Documentation: 
Available in the html format. Point a web browser on
your SGI system to:
file:/usr/local/fbscapp/ESPript/index.html
Web Site: 
http://prodes.toulouse.inra.fr/ESPript/
ABCC Contact Person:
Created By: 
miaskiew
Created Time: 
2001-11-20
Updated By:
Updated Time: 





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