ABCC : Application's document Page

GenomeInspector At ABCC
Name: 
GenomeInspector
Version(s): 
1.1
Category: 
Gene Regulation, Sequence Analysis, Bioinformatics
Author(s)/Vendor(s): 
K.Quandt, K.Grote, T.Werner
AG BIODV - Institut fuer Saeugetiergenetik
GSF, Forschungszentrum fuer Umwelt und Gesundheit
Ingolstaedter Landstr. 1, D-85764 Oberschleissheim
Germany
e-mail:  quandt@gsf.de
Program Description: 
GenomeInspector is a program for analysis of spatial correlations of
elements on DNA sequences

GenomeInspector detects distance correlations between sequence 
elements (e.g. between open reading frames and transcription factor
binding sites) on megabases of nucleotide sequences. 

Input data from a variety of sources (like data bank entry
annotations, GCG FindPatterns output, ConsInspector and MatInspector
output,...) can be used by GenomeInspector to detect any significant
correlation between sets of elements.
Computer platform(s): 
SGI
Location: 
/usr/local/fbscapp/GenomeInspector1.1
Access: 
set path = ($path /usr/local/fbscapp/GenomeInspector1.1)
GenomeInspector
Documentation: 
Files: README, correlations.doc, example_session.doc, 
extract.doc, general.doc, input.doc, other.doc,
points.doc, regions.doc in the 
/usr/local/fbscapp/GenomeInspector1.1 directory.
Web Site: 
http://www.gsf.de/biodv/genomeinspector.html
ABCC Contact Person:
Created By: 
miaskiew
Created Time: 
2001-10-26
Updated By: 
miaskiew
Updated Time: 
2001-10-26
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