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Volume 63(Pt 1);  January 1, 2007
Protein Structure Communications
Effects of the magnesium and chloride ions and shikimate on the structure of shikimate kinase from Mycobacterium tuberculosis
Marcio Vinicius Bertacine Dias, Lívia Maria Faím, Igor Bordin Vasconcelos, Jaim Simões de Oliveira, Luiz Augusto Basso, Diógenes Santiago Santos, and Walter Filgueira de Azevedo, Jr
The crystal structure of MtSK in complex with ADP shows conformational changes caused by the absence of the shikimate molecule, and the effect of chloride ions on the nucleotide binding site, and the crystal structure of MtSK in absence of magnesium shows its effect on the shikimate binding site.
Acta Crystallogr Sect F Struct Biol Cryst Commun. 2007 January 1; 63(Pt 1): 1–6. Published online 2006 December 16. doi: 10.1107/S1744309106046823.
PMCID: PMC2330112
Structure of the catalytic domain of the hyperthermophilic chitinase from Pyrococcus furiosus
Tsutomu Nakamura, Shouhei Mine, Yoshihisa Hagihara, Kazuhiko Ishikawa, and Koichi Uegaki
The crystal structure of the catalytic domain of a chitinase from P. furiosus is reported.
Acta Crystallogr Sect F Struct Biol Cryst Commun. 2007 January 1; 63(Pt 1): 7–11. Published online 2006 December 16. doi: 10.1107/S1744309106051773.
PMCID: PMC2330115
Crystallization Communications
Purification, crystallization and preliminary X-ray analysis of the BseCI DNA methyltransferase from Bacillus stearothermophilus in complex with its cognate DNA
Evangelia G. Kapetaniou, Dina Kotsifaki, Mary Providaki, Maria Rina, Vassilis Bouriotis, and Michael Kokkinidis
The DNA methyltransferase M.BseCI from B. stearothermophilus was crystallized as a complex with its cognate DNA. Crystals belong to space group P6 and diffract to 2.5 Å resolution at a synchrotron source.
Acta Crystallogr Sect F Struct Biol Cryst Commun. 2007 January 1; 63(Pt 1): 12–14. Published online 2006 December 16. doi: 10.1107/S1744309106051530.
PMCID: PMC2330102
Purification, crystallization and preliminary crystallographic analysis of archaeal 6-pyruvoyl tetrahydrobiopterin synthase homologue PH0634 from Pyrococcus horikoshii OT3
Bagautdin Bagautdinov, Mitsuaki Sugahara, and Naoki Kunishima
An archaeal 6-pyruvoyl tetrahydrobiopterin synthase homologue from P. horikoshii OT3 was overexpressed as native and selenomethionine-substituted protein, purified and crystallized. The native and selenomethionine-derivative crystals are isomorphous and diffract X-rays to 2.1 and 2.9 Å resolution, respectively.
Acta Crystallogr Sect F Struct Biol Cryst Commun. 2007 January 1; 63(Pt 1): 15–17. Published online 2006 December 16. doi: 10.1107/S1744309106051578.
PMCID: PMC2330099
Expression, purification and preliminary crystallographic studies on the catalytic region of the nonreceptor tyrosine kinase Fes
Ilaria Gnemmi, Claudia Scotti, Donata Cappelletti, Pier Luigi Canonico, Fabrizio Condorelli, and Camillo Rosano
The catalytic domain of human Fes tyrosine kinase has been cloned, expressed, purified and crystallized.
Acta Crystallogr Sect F Struct Biol Cryst Commun. 2007 January 1; 63(Pt 1): 18–20. Published online 2006 December 16. doi: 10.1107/S1744309106051682.
PMCID: PMC2330100
Purification, crystallization and preliminary crystallographic characterization of the caspase-recruitment domain of human Nod1
Thiagarajan Srimathi, Sheila L. Robbins, Rachel L. Dubas, Jang-Hoon Seo, and Young Chul Park
The caspase-recruitment domain of the cytosolic pathogen receptor Nod1 was crystallized. X-ray diffraction data were collected to 1.9 Å resolution.
Acta Crystallogr Sect F Struct Biol Cryst Commun. 2007 January 1; 63(Pt 1): 21–23. Published online 2006 December 16. doi: 10.1107/S1744309106051955.
PMCID: PMC2330101
Preliminary crystallographic analysis of avian infectious bronchitis virus main protease
Jun Li, Wei Shen, Ming Liao, and Mark Bartlam
The avian infectious bronchitis virus main protease has been crystallized; crystals diffract to 2.7 Å resolution.
Acta Crystallogr Sect F Struct Biol Cryst Commun. 2007 January 1; 63(Pt 1): 24–26. Published online 2006 December 16. doi: 10.1107/S1744309106052341.
PMCID: PMC2330114
Crystallization and preliminary crystallographic analysis of molybdenum-cofactor biosynthesis protein C from Thermus thermophilus
Shankar Prasad Kanaujia, Chellamuthu Vasuki Ranjani, Jeyaraman Jeyakanthan, Seiki Baba, Lirong Chen, Zhi-Jie Liu, Bi-Cheng Wang, Masami Nishida, Akio Ebihara, Akeo Shinkai, Seiki Kuramitsu, Yoshitsugu Shiro, Kanagaraj Sekar, and Shigeyuki Yokoyama
The molybdenum-cofactor biosynthesis protein C from T. thermophilus has been crystallized in two different space groups, P21 and R32; the crystals diffracted to 1.9 and 1.75 Å resolution, respectively.
Acta Crystallogr Sect F Struct Biol Cryst Commun. 2007 January 1; 63(Pt 1): 27–29. Published online 2006 December 16. doi: 10.1107/S1744309106052560.
PMCID: PMC2330104
Preliminary X-ray analysis of XC5848, a hypothetical ORFan protein with an Sm-like motif from Xanthomonas campestris
Sz-Kai Ruan, Ko-Hsin Chin, Hui-Lin Shr, Ping-Chiang Lyu, Andrew H.-J. Wang, and Shan-Ho Chou
A conserved hypothetical protein Se-XC5848 from X. campestris pv. campestris has been overexpressed in E. coli, purified and crystallized. Crystals obtained from the purified recombinant protein diffracted to a resolution of 1.68 Å.
Acta Crystallogr Sect F Struct Biol Cryst Commun. 2007 January 1; 63(Pt 1): 30–33. Published online 2006 December 16. doi: 10.1107/S1744309106052730.
PMCID: PMC2330107
Preliminary structural studies of the transcriptional regulator CmeR from Campylobacter jejuni
Chih-Chia Su, Feng Shi, Ruoyu Gu, Ming Li, Gerry McDermott, Edward W. Yu, and Qijing Zhang
The transcriptional regulator CmeR from C. jejuni has been purified and crystallized and X-ray diffraction data have been collected to a resolution of 2.2 Å.
Acta Crystallogr Sect F Struct Biol Cryst Commun. 2007 January 1; 63(Pt 1): 34–36. Published online 2006 December 16. doi: 10.1107/S1744309106053127.
PMCID: PMC2330109
Preliminary X-ray diffraction analysis of YcdB from Escherichia coli: a novel haem-containing and Tat-­secreted periplasmic protein with a potential role in iron transport
Michaël L. Cartron, Sue A. Mitchell, Mark R. Woodhall, Simon C. Andrews, and Kimberly A. Watson
The crystallization and structure determination of the apo form of a novel haem-containing Tat substrate, YcdB from E. coli, has been solved to 2.0 Å resolution. The preliminary structure shows similarity to other haem-dependent peroxidases, despite low sequence homology.
Acta Crystallogr Sect F Struct Biol Cryst Commun. 2007 January 1; 63(Pt 1): 37–41. Published online 2006 December 22. doi: 10.1107/S174430910604509X.
PMCID: PMC2330106
Preliminary time-of-flight neutron diffraction study on diisopropyl fluorophosphatase (DFPase) from Loligo vulgaris
Marc-Michael Blum, Alexander Koglin, Heinz Rüterjans, Benno Schoenborn, Paul Langan, and Julian C.-H. Chen
Diisopropyl fluorophosphatase (DFPase) effectively hydrolyzes a number of organophosphorus nerve agents, including sarin, cyclohexylsarin, soman and tabun. Neutron diffraction data have been collected from DFPase crystals to 2.2 Å resolution in an effort to gain further insight into the mechanism of this enzyme.
Acta Crystallogr Sect F Struct Biol Cryst Commun. 2007 January 1; 63(Pt 1): 42–45. Published online 2006 December 22. doi: 10.1107/S1744309106052924.
PMCID: PMC2330113
Crystallization and preliminary X-ray diffraction analysis of an Escherichia coli tRNAGly acceptor-stem microhelix
Charlotte Förster, Markus Perbandt, Arnd B. E. Brauer, Svenja Brode, Jens P. Fürste, Christian Betzel, and Volker A. Erdmann
In order to investigate the identity elements of the E. coli tRNAGly/GlyRS class II system, a tRNAGly acceptor-stem microhelix was crystallized and a data set was collected to 2.0 Å resolution using synchrotron radiation.
Acta Crystallogr Sect F Struct Biol Cryst Commun. 2007 January 1; 63(Pt 1): 46–48. Published online 2006 December 22. doi: 10.1107/S1744309106052870.
PMCID: PMC2330105
Crystallographic characterization of the radixin FERM domain bound to the cytoplasmic tails of adhesion molecules CD43 and PSGL-1
Yumiko Takai, Ken Kitano, Shin-ichi Terawaki, Ryoko Maesaki, and Toshio Hakoshima
The radixin FERM domain has been crystallized in complex with CD43 and PSGL-1 peptides. Diffraction data sets were collected from the complexes to 2.9 and 2.8 Å resolution, respectively.
Acta Crystallogr Sect F Struct Biol Cryst Commun. 2007 January 1; 63(Pt 1): 49–51. Published online 2006 December 22. doi: 10.1107/S1744309106054145.
PMCID: PMC2330108
Exploration of triple-helical fragments: crystallization and preliminary X-ray diffraction of d(TGGCCTTAAGG)
Kristof Van Hecke, Koen Uytterhoeven, and Luc Van Meervelt
The crystallization and X-ray data collection of the undecamer d(TGGCCTTAAGG) are reported.
Acta Crystallogr Sect F Struct Biol Cryst Commun. 2007 January 1; 63(Pt 1): 52–55. Published online 2006 December 22. doi: 10.1107/S1744309106054522.
PMCID: PMC2330110
Purification, crystallization and preliminary crystallographic analysis of the putative thiamine-biosynthesis protein PH1313 from Pyrococcus horikoshii OT3
Michihiro Sugahara, Satoko Murai, Mitsuaki Sugahara, and Naoki Kunishima
The putative thiamine-biosynthesis protein PH1313 from P. horikoshii OT3 was overexpressed, purified and crystallized. The crystals belong to space group P212121 and diffract X-rays to 1.9 Å resolution.
Acta Crystallogr Sect F Struct Biol Cryst Commun. 2007 January 1; 63(Pt 1): 56–58. Published online 2006 December 22. doi: 10.1107/S1744309106054509.
PMCID: PMC2330111
Addenda and Errata
Crystallization and preliminary X-ray diffraction analysis of two N-terminal fragments of the DNA-cleavage domain of topoisomerase IV from Staphylococcus aureus. Corrigendum
Stephen B. Carr, George Makris, Simon E. V. Phillips, and Christopher D. Thomas
A corrigendum to the paper by Carr et al. (2006), Acta Cryst. F62, 1164–1167.
Acta Crystallogr Sect F Struct Biol Cryst Commun. 2007 January 1; 63(Pt 1): 59. Published online 2006 December 22. doi: 10.1107/S1744309106054650.
PMCID: PMC2330103
Corrects:Stephen B. Carr, et al. Crystallization and preliminary X-ray diffraction analysis of two N-terminal fragments of the DNA-cleavage domain of topoisomerase IV from Staphylococcus aureus . Acta Crystallogr Sect F Struct Biol Cryst Commun. 2006 November 1; 62(Pt 11): 1164–1167.
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