pmc logo imageJournal ListSearchpmc logo image
Logo of pnasPNAS Home page.PNAS Editorial BoardPNAS AboutPNAS SubscriptionsPNAS Info for Authors
This journal provides immediate access to some articles.
Other Issues:  previous | next | latest | archive
Volume 101(45);  November 9, 2004
Commentary
Two important polymers cross paths
James A. Spudich
Proc Natl Acad Sci U S A. 2004 November 9; 101(45): 15825–15826. Published online 2004 November 2. doi: 10.1073/pnas.0406932101.
PMCID: PMC528761
Perspective
Curbing the U.S. carbon deficit
Robert B. Jackson and William H. Schlesinger
Proc Natl Acad Sci U S A. 2004 November 9; 101(45): 15827–15829. Published online 2004 October 28. doi: 10.1073/pnas.0403631101.
PMCID: PMC528743
Physical Sciences
Applied Mathematics
The stochastic piston problem
G. Lin, C. H. Su, and G. E. Karniadakis
Proc Natl Acad Sci U S A. 2004 November 9; 101(45): 15840–15845. Published online 2004 October 28. doi: 10.1073/pnas.0405889101.
PMCID: PMC528754
Applied Physical Sciences
Age-related reduction in microcolumnar structure in area 46 of the rhesus monkey correlates with behavioral decline
Luis Cruz, Daniel L. Roe, Brigita Urbanc, Howard Cabral, H. E. Stanley, and Douglas L. Rosene
Proc Natl Acad Sci U S A. 2004 November 9; 101(45): 15846–15851. Published online 2004 November 1. doi: 10.1073/pnas.0407002101.
PMCID: PMC528765
Heterogeneity explains features of “anomalous” thermodynamics and statistics
Stefan Gheorghiu and Marc-Olivier Coppens
Proc Natl Acad Sci U S A. 2004 November 9; 101(45): 15852–15856. Published online 2004 October 28. doi: 10.1073/pnas.0407191101.
PMCID: PMC528778
Chemistry
Melyrid beetles (Choresine): A putative source for the batrachotoxin alkaloids found in poison-dart frogs and toxic passerine birds
John P. Dumbacher, Avit Wako, Scott R. Derrickson, Allan Samuelson, Thomas F. Spande, and John W. Daly
Proc Natl Acad Sci U S A. 2004 November 9; 101(45): 15857–15860. Published online 2004 November 1. doi: 10.1073/pnas.0407197101.
PMCID: PMC528779
Computer Sciences
Identification of hair cycle-associated genes from time-course gene expression profile data by using replicate variance
Kevin K. Lin, Darya Chudova, G. Wesley Hatfield, Padhraic Smyth, and Bogi Andersen
Proc Natl Acad Sci U S A. 2004 November 9; 101(45): 15955–15960. Published online 2004 November 1. doi: 10.1073/pnas.0407114101.
PMCID: PMC524696
Engineering
From the Cover:
Computerized microfluidic cell culture using elastomeric channels and Braille displays
Wei Gu, Xiaoyue Zhu, Nobuyuki Futai, Brenda S. Cho, and Shuichi Takayama
Proc Natl Acad Sci U S A. 2004 November 9; 101(45): 15861–15866. Published online 2004 October 28. doi: 10.1073/pnas.0404353101.
PMCID: PMC528755
Geophysics
Ferromagnesian postperovskite silicates in the D″ layer of the Earth
Wendy L. Mao, Guoyin Shen, Vitali B. Prakapenka, Yue Meng, Andrew J. Campbell, Dion L. Heinz, Jinfu Shu, Russell J. Hemley, and Ho-kwang Mao
Proc Natl Acad Sci U S A. 2004 November 9; 101(45): 15867–15869. Published online 2004 November 1. doi: 10.1073/pnas.0407135101.
PMCID: PMC528774
Biological Sciences
Biochemistry
A locking mechanism preventing radical damage in the absence of substrate, as revealed by the x-ray structure of lysine 5,6-aminomutase
Frederick Berkovitch, Elham Behshad, Kuo-Hsiang Tang, Eva A. Enns, Perry A. Frey, and Catherine L. Drennan
Proc Natl Acad Sci U S A. 2004 November 9; 101(45): 15870–15875. Published online 2004 October 28. doi: 10.1073/pnas.0407074101.
PMCID: PMC528771
Formation of an actin-like filament concurrent with the enzymatic synthesis of inorganic polyphosphate
María R. Gómez-García and Arthur Kornberg
Proc Natl Acad Sci U S A. 2004 November 9; 101(45): 15876–15880. Published online 2004 October 20. doi: 10.1073/pnas.0406923101.
PMCID: PMC528760
An unusual tryptophanyl tRNA synthetase interacts with nitric oxide synthase in Deinococcus radiodurans
Madhavan R. Buddha, Kim M. Keery, and Brian R. Crane
Proc Natl Acad Sci U S A. 2004 November 9; 101(45): 15881–15886. Published online 2004 November 1. doi: 10.1073/pnas.0405483101.
PMCID: PMC528745
Mechanisms of ammonia activation and ammonium ion inhibition of quinoprotein methanol dehydrogenase: A computational approach
Swarnalatha Y. Reddy and Thomas C. Bruice
Proc Natl Acad Sci U S A. 2004 November 9; 101(45): 15887–15892. Published online 2004 November 1. doi: 10.1073/pnas.0407209101.
PMCID: PMC528780
Folding of human superoxide dismutase: Disulfide reduction prevents dimerization and produces marginally stable monomers
Mikael J. Lindberg, Johanna Normark, Arne Holmgren, and Mikael Oliveberg
Proc Natl Acad Sci U S A. 2004 November 9; 101(45): 15893–15898. Published online 2004 November 2. doi: 10.1073/pnas.0403979101.
PMCID: PMC528748
Computational modeling reveals how interplay between components of a GTPase-cycle module regulates signal transduction
Scott J. Bornheimer, Mano R. Maurya, Marilyn Gist Farquhar, and Shankar Subramaniam
Proc Natl Acad Sci U S A. 2004 November 9; 101(45): 15899–15904. Published online 2004 November 1. doi: 10.1073/pnas.0407009101.
PMCID: PMC524695
Biophysics
EosFP, a fluorescent marker protein with UV-inducible green-to-red fluorescence conversion
Jörg Wiedenmann, Sergey Ivanchenko, Franz Oswald, Florian Schmitt, Carlheinz Röcker, Anya Salih, Klaus-Dieter Spindler, and G. Ulrich Nienhaus
Proc Natl Acad Sci U S A. 2004 November 9; 101(45): 15905–15910. Published online 2004 October 25. doi: 10.1073/pnas.0403668101.
PMCID: PMC528746
An acoustic microscopy technique reveals hidden morphological defenses in Daphnia
Christian Laforsch, Wilfred Ngwa, Wolfgang Grill, and Ralph Tollrian
Proc Natl Acad Sci U S A. 2004 November 9; 101(45): 15911–15914. Published online 2004 November 1. doi: 10.1073/pnas.0404860101.
PMCID: PMC528736
Understanding the key factors that control the rate of β-hairpin folding
Deguo Du, Yongjin Zhu, Cheng-Yen Huang, and Feng Gai
Proc Natl Acad Sci U S A. 2004 November 9; 101(45): 15915–15920. Published online 2004 November 1. doi: 10.1073/pnas.0405904101.
PMCID: PMC528756
Visualization of the movement of single histidine kinase molecules in live Caulobacter cells
J. Deich, E. M. Judd, H. H. McAdams, and W. E. Moerner
Proc Natl Acad Sci U S A. 2004 November 9; 101(45): 15921–15926. Published online 2004 November 2. doi: 10.1073/pnas.0404200101.
PMCID: PMC528753
Cell Biology
From the Cover:
Computerized microfluidic cell culture using elastomeric channels and Braille displays
Wei Gu, Xiaoyue Zhu, Nobuyuki Futai, Brenda S. Cho, and Shuichi Takayama
Proc Natl Acad Sci U S A. 2004 November 9; 101(45): 15861–15866. Published online 2004 October 28. doi: 10.1073/pnas.0404353101.
PMCID: PMC528755
OPA1 requires mitofusin 1 to promote mitochondrial fusion
Sara Cipolat, Olga Martins de Brito, Barbara Dal Zilio, and Luca Scorrano
Proc Natl Acad Sci U S A. 2004 November 9; 101(45): 15927–15932. Published online 2004 October 27. doi: 10.1073/pnas.0407043101.
PMCID: PMC528769
In vivo dynamics of chromatin-associated complex formation in mammalian nucleotide excision repair
Martijn J. Moné, Tytus Bernas, Christoffel Dinant, Feliks A. Goedvree, Erik M. M. Manders, Marcel Volker, Adriaan B. Houtsmuller, Jan H. J. Hoeijmakers, Wim Vermeulen, and Roel van Driel
Proc Natl Acad Sci U S A. 2004 November 9; 101(45): 15933–15937. Published online 2004 November 1. doi: 10.1073/pnas.0403664101.
PMCID: PMC528744
Model for anaphase B: Role of three mitotic motors in a switch from poleward flux to spindle elongation
I. Brust-Mascher, G. Civelekoglu-Scholey, M. Kwon, A. Mogilner, and J. M. Scholey
Proc Natl Acad Sci U S A. 2004 November 9; 101(45): 15938–15943. Published online 2004 November 2. doi: 10.1073/pnas.0407044101.
PMCID: PMC524698
From the Cover:
Neuronal nitric oxide synthase negatively regulates xanthine oxidoreductase inhibition of cardiac excitation-contraction coupling
Shakil A. Khan, Kwangho Lee, Khalid M. Minhas, Daniel R. Gonzalez, Shubha V. Y. Raju, Ankit D. Tejani, Dechun Li, Dan E. Berkowitz, and Joshua M. Hare
Proc Natl Acad Sci U S A. 2004 November 9; 101(45): 15944–15948. Published online 2004 October 14. doi: 10.1073/pnas.0404136101.
PMCID: PMC528749
Developmental Biology
Haploinsufficiency of delta-like 4 ligand results in embryonic lethality due to major defects in arterial and vascular development
Nicholas W. Gale, Melissa G. Dominguez, Irene Noguera, Li Pan, Virginia Hughes, David M. Valenzuela, Andrew J. Murphy, Niels C. Adams, Hsin Chieh Lin, Jocelyn Holash, Gavin Thurston, and George D. Yancopoulos
Proc Natl Acad Sci U S A. 2004 November 9; 101(45): 15949–15954. Published online 2004 November 1. doi: 10.1073/pnas.0407290101.
PMCID: PMC524697
Identification of hair cycle-associated genes from time-course gene expression profile data by using replicate variance
Kevin K. Lin, Darya Chudova, G. Wesley Hatfield, Padhraic Smyth, and Bogi Andersen
Proc Natl Acad Sci U S A. 2004 November 9; 101(45): 15955–15960. Published online 2004 November 1. doi: 10.1073/pnas.0407114101.
PMCID: PMC524696
Evidence that the cysteine-rich domain of Drosophila Frizzled family receptors is dispensable for transducing Wingless
Chiann-mun Chen, Walter Strapps, Andrew Tomlinson, and Gary Struhl
Proc Natl Acad Sci U S A. 2004 November 9; 101(45): 15961–15966. Published online 2004 October 28. doi: 10.1073/pnas.0407103101.
PMCID: PMC528772
Evolution
Chicken W: A genetically uniform chromosome in a highly variable genome
Sofia Berlin and Hans Ellegren
Proc Natl Acad Sci U S A. 2004 November 9; 101(45): 15967–15969. Published online 2004 November 1. doi: 10.1073/pnas.0405126101.
PMCID: PMC528742
Discriminating males alter sperm production between species
Andrea S. Aspbury and Caitlin R. Gabor
Proc Natl Acad Sci U S A. 2004 November 9; 101(45): 15970–15973. Published online 2004 November 1. doi: 10.1073/pnas.0405653101.
PMCID: PMC528751
Genetics
From the Cover:
Identification of alternative splicing regulators by RNA interference in Drosophila
Jung W. Park, Katherine Parisky, Alicia M. Celotto, Robert A. Reenan, and Brenton R. Graveley
Proc Natl Acad Sci U S A. 2004 November 9; 101(45): 15974–15979. Published online 2004 October 18. doi: 10.1073/pnas.0407004101.
PMCID: PMC528766
Mitotic checkpoint function in the formation of gross chromosomal rearrangements in Saccharomyces cerevisiae
Kyungjae Myung, Stephanie Smith, and Richard D. Kolodner
Proc Natl Acad Sci U S A. 2004 November 9; 101(45): 15980–15985. Published online 2004 October 28. doi: 10.1073/pnas.0407010101.
PMCID: PMC528767
Centromere-encoded RNAs are integral components of the maize kinetochore
Christopher N. Topp, Cathy X. Zhong, and R. Kelly Dawe
Proc Natl Acad Sci U S A. 2004 November 9; 101(45): 15986–15991. Published online 2004 October 28. doi: 10.1073/pnas.0407154101.
PMCID: PMC528775
Multiple rare variants in different genes account for multifactorial inherited susceptibility to colorectal adenomas
Nicola S. Fearnhead, Jennifer L. Wilding, Bruce Winney, Susan Tonks, Sylvia Bartlett, David C. Bicknell, Ian P. M. Tomlinson, Neil J. McC. Mortensen, and Walter F. Bodmer
Proc Natl Acad Sci U S A. 2004 November 9; 101(45): 15992–15997. Published online 2004 November 1. doi: 10.1073/pnas.0407187101.
PMCID: PMC528777
Sir2 mediates longevity in the fly through a pathway related to calorie restriction
Blanka Rogina and Stephen L. Helfand
Proc Natl Acad Sci U S A. 2004 November 9; 101(45): 15998–16003. Published online 2004 November 1. doi: 10.1073/pnas.0404184101.
PMCID: PMC528752
Immunology
Antigen-independent memory CD8 T cells do not develop during chronic viral infection
E. John Wherry, Daniel L. Barber, Susan M. Kaech, Joseph N. Blattman, and Rafi Ahmed
Proc Natl Acad Sci U S A. 2004 November 9; 101(45): 16004–16009. Published online 2004 October 25. doi: 10.1073/pnas.0407192101.
PMCID: PMC524220
Molecular analysis of a locus control region in the T helper 2 cytokine gene cluster: A target for STAT6 but not GATA3
Dong U. Lee and Anjana Rao
Proc Natl Acad Sci U S A. 2004 November 9; 101(45): 16010–16015. Published online 2004 October 26. doi: 10.1073/pnas.0407031101.
PMCID: PMC528768
Medical Sciences
Loss of Runx3 function in leukocytes is associated with spontaneously developed colitis and gastric mucosal hyperplasia
Ori Brenner, Ditsa Levanon, Varda Negreanu, Olga Golubkov, Ofer Fainaru, Eilon Woolf, and Yoram Groner
Proc Natl Acad Sci U S A. 2004 November 9; 101(45): 16016–16021. Published online 2004 October 28. doi: 10.1073/pnas.0407180101.
PMCID: PMC528776
Induction in myeloid leukemic cells of genes that are expressed in different normal tissues
Joseph Lotem, Hila Benjamin, Dvir Netanely, Eytan Domany, and Leo Sachs
Proc Natl Acad Sci U S A. 2004 November 9; 101(45): 16022–16027. Published online 2004 October 25. doi: 10.1073/pnas.0406966101.
PMCID: PMC528762
From the Cover:
A polymer library approach to suicide gene therapy for cancer
Daniel G. Anderson, Weidan Peng, Akin Akinc, Naushad Hossain, Anat Kohn, Robert Padera, Robert Langer, and Janet A. Sawicki
Proc Natl Acad Sci U S A. 2004 November 9; 101(45): 16028–16033. Published online 2004 November 1. doi: 10.1073/pnas.0407218101.
PMCID: PMC528737
Microbiology
Biography of E. P. Greenberg
Tinsley H. Davis
Proc Natl Acad Sci U S A. 2004 November 9; 101(45): 15830–15832. Published online 2004 November 1. doi: 10.1073/pnas.0407738101.
PMCID: PMC528758
Promoter specificity in Pseudomonas aeruginosa quorum sensing revealed by DNA binding of purified LasR
M. Schuster, M. L. Urbanowski, and E. P. Greenberg
Proc Natl Acad Sci U S A. 2004 November 9; 101(45): 15833–15839. Published online 2004 October 25. doi: 10.1073/pnas.0407229101.
PMCID: PMC528741
Local modulation of plus-end transport targets herpesvirus entry and egress in sensory axons
G. A. Smith, L. Pomeranz, S. P. Gross, and L. W. Enquist
Proc Natl Acad Sci U S A. 2004 November 9; 101(45): 16034–16039. Published online 2004 October 25. doi: 10.1073/pnas.0404686101.
PMCID: PMC528757
Different functions of HetR, a master regulator of heterocyst differentiation in Anabaena sp. PCC 7120, can be separated by mutation
Ivan Y. Khudyakov and James W. Golden
Proc Natl Acad Sci U S A. 2004 November 9; 101(45): 16040–16045. Published online 2004 November 1. doi: 10.1073/pnas.0405572101.
PMCID: PMC528747
Neuroscience
Age-related reduction in microcolumnar structure in area 46 of the rhesus monkey correlates with behavioral decline
Luis Cruz, Daniel L. Roe, Brigita Urbanc, Howard Cabral, H. E. Stanley, and Douglas L. Rosene
Proc Natl Acad Sci U S A. 2004 November 9; 101(45): 15846–15851. Published online 2004 November 1. doi: 10.1073/pnas.0407002101.
PMCID: PMC528765
Dopamine transporters depolarize neurons by a channel mechanism
Lucia Carvelli, Paul W. McDonald, Randy D. Blakely, and Louis J. DeFelice
Proc Natl Acad Sci U S A. 2004 November 9; 101(45): 16046–16051. Published online 2004 November 1. doi: 10.1073/pnas.0403299101.
PMCID: PMC528740
Cell-density-dependent regulation of neural precursor cell function
Charles L. Limoli, Radoslaw Rola, Erich Giedzinski, Sailaja Mantha, Ting-Ting Huang, and John R. Fike
Proc Natl Acad Sci U S A. 2004 November 9; 101(45): 16052–16057. Published online 2004 November 2. doi: 10.1073/pnas.0407065101.
PMCID: PMC528770
A clock gene, period, plays a key role in long-term memory formation in Drosophila
Takaomi Sakai, Takuya Tamura, Toshihiro Kitamoto, and Yoshiaki Kidokoro
Proc Natl Acad Sci U S A. 2004 November 9; 101(45): 16058–16063. Published online 2004 November 2. doi: 10.1073/pnas.0401472101.
PMCID: PMC528738
From the Cover:
A reexamination of the evidence for the somatic marker hypothesis: What participants really know in the Iowa gambling task
Tiago V. Maia and James L. McClelland
Proc Natl Acad Sci U S A. 2004 November 9; 101(45): 16075–16080. Published online 2004 October 22. doi: 10.1073/pnas.0406666101.
PMCID: PMC528759
Physiology
Neuronal Shp2 tyrosine phosphatase controls energy balance and metabolism
Eric E. Zhang, Emilie Chapeau, Kazuki Hagihara, and Gen-Sheng Feng
Proc Natl Acad Sci U S A. 2004 November 9; 101(45): 16064–16069. Published online 2004 November 1. doi: 10.1073/pnas.0405041101.
PMCID: PMC528739
Plant Biology
Natural variation in expression of self-incompatibility in Arabidopsis thaliana: Implications for the evolution of selfing
M. E. Nasrallah, P. Liu, S. Sherman-Broyles, N. A. Boggs, and J. B. Nasrallah
Proc Natl Acad Sci U S A. 2004 November 9; 101(45): 16070–16074. Published online 2004 October 25. doi: 10.1073/pnas.0406970101.
PMCID: PMC528763
Social Sciences
Psychology
From the Cover:
A reexamination of the evidence for the somatic marker hypothesis: What participants really know in the Iowa gambling task
Tiago V. Maia and James L. McClelland
Proc Natl Acad Sci U S A. 2004 November 9; 101(45): 16075–16080. Published online 2004 October 22. doi: 10.1073/pnas.0406666101.
PMCID: PMC528759
Corrections
Proc Natl Acad Sci U S A. 2004 November 9; 101(45): 16081. doi: 10.1073/pnas.0407104101.
PMCID: PMC528773
Corrects: Tobias Willer, et al. Targeted disruption of the Walker–Warburg syndrome gene Pomt1 in mouse results in embryonic lethality. Proc Natl Acad Sci U S A. 2004 September 28; 101(39): 14126–14131.
Proc Natl Acad Sci U S A. 2004 November 9; 101(45): 16081. doi: 10.1073/pnas.0407342101.
PMCID: PMC528781
Corrects: Alan R. Fersht. Relationship of Leffler (Brønsted) α values and protein folding Φ values to position of transition-state structures on reaction coordinates. Proc Natl Acad Sci U S A. 2004 October 5; 101(40): 14338–14342.
Proc Natl Acad Sci U S A. 2004 November 9; 101(45): 16081. doi: 10.1073/pnas.0407382101.
PMCID: PMC528750
Corrects: A. Thiele, et al. Contribution of inhibitory mechanisms to direction selectivity and response normalization in macaque middle temporal area. Proc Natl Acad Sci U S A. 2004 June 29; 101(26): 9810–9815.
Retraction
Daniel F. Klessig, Gregory B. Martin, and Sophia K. Ekengren
Proc Natl Acad Sci U S A. 2004 November 9; 101(45): 16081. Published online 2004 October 29. doi: 10.1073/pnas.0406996101.
PMCID: PMC528764
Retracts: Meena R. Chandok, et al. Suppression of pathogen-inducible NO synthase (iNOS) activity in tomato increases susceptibility to Pseudomonas syringae. Proc Natl Acad Sci U S A. 2004 May 25; 101(21): 8239–8244.
Other Issues:  previous | next | latest | archive