Heparan sulfate proteoglycan 2, Homo sapiens

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Finding cDNAs

UGID:1777771 UniGene Hs.562227 Homo sapiens (human) HSPG2

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Heparan sulfate proteoglycan 2 (HSPG2)

SELECTED PROTEIN SIMILARITIES

Comparison of sequences in UniGene with selected protein reference sequences. The alignments can suggest function of a gene.

Reference Protein		Species	Id(%)	Len(aa)
XP_535371.2	PREDICTED: similar to Basement membrane-specific heparan sulfate proteoglycan core protein precursor (HSPG) (Perlecan) (PLC)	C. lupus familiaris	87.8	2542

GENE EXPRESSION

Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.

	Expression Profile:	View expression levels using UniGene's EST ProfileViewer [Show more entries with profiles like this]
	GEO profiles:	Gene expression profiles in the NCBI Gene Expression Omnibus database
	cDNA Sources:	uterus; embryonic tissue; pancreas; uncharacterized tissue; placenta; intestine; brain; lung; skin; connective tissue; ovary; spleen; adrenal gland; trachea; kidney; muscle; prostate; nerve; stomach; eye; mixed; mammary gland; testis; esophagus; bladder; ganglia; epididymis; pharynx; larynx; bone; amniotic fluid; thyroid; mouth; heart; vascular; adipose tissue; blood; thymus; liver

MAPPING POSITION

Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.

	Chromosome:	1
	Map position:	1p36.1-p34

SEQUENCES

Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (12)

CR621055.1	full-length cDNA clone CS0DI055YE07 of Placenta Cot 25-normalized of Homo sapiens (human)	P
NM_005529.5	Homo sapiens heparan sulfate proteoglycan 2 (HSPG2), mRNA	A
M85289.1	Human heparan sulfate proteoglycan (HSPG2) mRNA, complete cds	P
AB209851.1	Homo sapiens mRNA for Basement membrane-specific heparan sulfate proteoglycan core protein precursor variant protein	P
BC109204.1	Homo sapiens heparan sulfate proteoglycan 2, mRNA (cDNA clone IMAGE:40005996), partial cds	P
BC128555.1	Homo sapiens cDNA clone IMAGE:40122541
BC128556.1	Homo sapiens cDNA clone IMAGE:40122548
AF479675.1	Homo sapiens perlecan variant miniperl mRNA, complete cds; alternatively spliced	P
X62515.1	H.sapiens mRNA for basement membrane heparan sulfate proteoglycan	P
BC033152.1	Homo sapiens heparan sulfate proteoglycan 2, mRNA (cDNA clone IMAGE:4131756), with apparent retained intron	A
S76436.1	Homo sapiens heparan sulfate proteoglycan core protein (HSPG2) mRNA, partial cds	P
M64283.1	Human heparan sulfate proteoglycan (HSPG2) protein core mRNA, partial cds	P

EST sequences (10 of 492) [Show all sequences]

AA905568.1	Clone IMAGE:1506262	mixed	3' read	A
AA974966.1	Clone IMAGE:1555509	kidney	3' read	A
AA977215.1	Clone IMAGE:1587411	uncharacterized tissue	3' read	A
AI125812.1	Clone IMAGE:1737296	testis	3' read	A
AI131329.1	Clone IMAGE:1709947	heart	3' read	A
AI139149.1	Clone IMAGE:1710051	heart	3' read	A
R23999.1	Clone IMAGE:131137	placenta	5' read	P
AI188115.1	Clone IMAGE:1734372	testis	3' read
R26043.1	Clone IMAGE:132739	placenta	5' read	P
AI202465.1	Clone IMAGE:1943160	prostate	3' read	A

Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria