Oral-facial-digital syndrome 1, Homo sapiens

Expression Profile:

View expression levels using UniGene's EST ProfileViewer
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Highly represented (3.7 pct) in cDNA library dbEST:8221, NT0141.

Highly represented (1.9 pct) in cDNA library dbEST:5942, UT0033.

Highly represented (1.5 pct) in cDNA library dbEST:7734, HT0974.

GEO profiles:

Gene expression profiles in the NCBI Gene Expression Omnibus database

cDNA Sources:

brain; ear; bladder; pituitary gland; testis; ovary; connective tissue; larynx; adrenal gland; pharynx; mammary gland; uncharacterized tissue; mixed; lymph node; lung; uterus; liver; intestine; embryonic tissue; thyroid; muscle; prostate; kidney; mouth; thymus; placenta; skin; heart; ascites; vascular; blood; pancreas; eye; cervix

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Finding cDNAs

UGID:131879 UniGene Hs.6483 Homo sapiens (human) OFD1

Order cDNA clone, Links

Oral-facial-digital syndrome 1 (OFD1)

SELECTED PROTEIN SIMILARITIES

Comparison of sequences in UniGene with selected protein reference sequences. The alignments can suggest function of a gene.

Reference Protein		Species	Id(%)	Len(aa)
NP_003602.1	oral-facial-digital syndrome 1	H. sapiens	100.0	1011
NP_803178.1	oral-facial-digital syndrome 1 gene homolog	M. musculus	73.7	1016

GENE EXPRESSION

Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.

MAPPING POSITION

Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.

Chromosome:	X
Map position:	Xp22
UniSTS entry:	Chr X	RH47405
UniSTS entry:	Chr X	DXS1152

SEQUENCES

Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (15)

BC042830.1	Homo sapiens oral-facial-digital syndrome 1, mRNA (cDNA clone IMAGE:5302058), complete cds	PA
Y15164.1	Homo sapiens mRNA for protein encoded by cxorf5 (71-7A) gene	PA
BC052809.1	Homo sapiens oral-facial-digital syndrome 1, mRNA (cDNA clone IMAGE:6151125), partial cds	PA
NM_003611.2	Homo sapiens oral-facial-digital syndrome 1 (OFD1), mRNA	PA
BC062432.1	Homo sapiens oral-facial-digital syndrome 1, mRNA (cDNA clone IMAGE:6495872), partial cds	PA
BC092448.1	Homo sapiens oral-facial-digital syndrome 1, mRNA (cDNA clone IMAGE:30350282), containing frame-shift errors	PA
BC096344.3	Homo sapiens oral-facial-digital syndrome 1, mRNA (cDNA clone MGC:117038 IMAGE:40008704), complete cds	P
BC096345.1	Homo sapiens oral-facial-digital syndrome 1, mRNA (cDNA clone IMAGE:40008707), complete cds	P
AK225847.1	Homo sapiens mRNA for Splice isoform 2 of O75665 variant, clone: FCC126B11	PA
AK290354.1	Homo sapiens cDNA FLJ78705 complete cds, highly similar to Homo sapiens oral-facial-digital syndrome 1 (OFD1), mRNA	PA
AK289677.1	Homo sapiens cDNA FLJ75575 complete cds, highly similar to Oral-facial-digital syndrome 1 protein (Protein 71-7A)	P
AK311067.1	Homo sapiens cDNA, FLJ18109	P
AK297104.1	Homo sapiens cDNA FLJ52326 complete cds, highly similar to Oral-facial-digital syndrome 1 protein	PA
BC030787.1	Homo sapiens oral-facial-digital syndrome 1, mRNA (cDNA clone IMAGE:5267734), with apparent retained intron	PA
BC012324.1	Homo sapiens oral-facial-digital syndrome 1, mRNA (cDNA clone IMAGE:4555096), with apparent retained intron	PA

EST sequences (10 of 290) [Show all sequences]

AA994778.1	Clone IMAGE:1631303	mammary gland	3' read	PA
AI022424.1	Clone IMAGE:1654690	mixed	3' read	P
R18599.1	Clone IMAGE:30703	brain	5' read	P
AI049632.1	Clone IMAGE:1700282	kidney	3' read	PA
BX104531.1	Clone IMAGp998A111791_;_IMAGE:729874	testis		P
CB162920.1	Clone L18POOL1n1-18-A07	liver	5' read	P
CB134304.1	Clone L14ChoiCK0-12-D02	liver	5' read	P
CB136303.1	Clone L14ChoiCK0-21-H12	liver	5' read	P
CB149556.1	Clone L15CKK1-46-E05	liver	5' read	P
AI277389.1	Clone IMAGE:1892958	placenta	3' read	PA

Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria