NCBI UniGene banner graphic
PubMed Nucleotide Protein Genome Structure Popset Taxonomy
 Search
NCBI

UniGene
Homepage
FAQs
Query Tips
Library Browser
DDD
Download UniGene

Related Databases
Gene
HomoloGene
dbEST
Trace Archive

NIH cDNA Projects
MGC | ZGC | XGC
Finding cDNAs
UGID:2224759     UniGene Hs.643588     Homo sapiens (human)   PITX2 Order cDNA clone, Links
Paired-like homeodomain 2 (PITX2)
SELECTED PROTEIN SIMILARITIES
Comparison of sequences in UniGene with selected protein reference sequences. The alignments can suggest function of a gene.
Reference ProteinSpeciesId(%)Len(aa)
XP_001141320.1 PREDICTED: paired-like homeodomain transcription factor 2 isoform 4 P. troglodytes 100.0 316
NP_001035969.1 paired-like homeodomain transcription factor 2 isoform a M. musculus 100.0 270
XP_001091165.1 PREDICTED: similar to paired-like homeodomain transcription factor 2 isoform 3 M. mulatta 100.0 270
NP_700476.1 paired-like homeodomain transcription factor 2 isoform a H. sapiens 100.0 270
NP_788770.1 Ptx1 CG1447-PB, isoform B D. melanogaster 62.1 261

GENE EXPRESSION
Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.
Expression Profile: View expression levels using UniGene's EST ProfileViewer
[Show more entries with profiles like this]
GEO profiles: Gene expression profiles in the NCBI Gene Expression Omnibus database
cDNA Sources: placenta; eye; uncharacterized tissue; cervix; embryonic tissue; pituitary gland; mouth; mixed; uterus; liver; testis; muscle; intestine; lung; umbilical cord; skin; kidney; esophagus; brain; heart; bone
MAPPING POSITION
Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.
Chromosome: 4
Map position: 4q25-q27
SEQUENCES
Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (18)

AF048720.1 Homo sapiens ALL1 responsive protein ARP1a (ARP1) mRNA, complete cds PA
AF048721.1 Homo sapiens ALL1 responsive protein ARP1b (ARP1) mRNA, complete cds PA
AF048722.1 Homo sapiens ALL1 responsive protein ARP1c (ARP1) mRNA, complete cds PA
AK127829.1 Homo sapiens cDNA FLJ45932 fis, clone PLACE7002303, highly similar to Pituitary homeobox 2 P
NM_000325.5 Homo sapiens paired-like homeodomain 2 (PITX2), transcript variant 3, mRNA A
CR623307.1 full-length cDNA clone CS0DI056YL14 of Placenta Cot 25-normalized of Homo sapiens (human) P
CR610480.1 full-length cDNA clone CS0DI040YL22 of Placenta Cot 25-normalized of Homo sapiens (human) P
CR605855.1 full-length cDNA clone CS0DI022YP01 of Placenta Cot 25-normalized of Homo sapiens (human) P
CR604884.1 full-length cDNA clone CS0DI081YM22 of Placenta Cot 25-normalized of Homo sapiens (human) P
CR602984.1 full-length cDNA clone CS0DI027YF04 of Placenta Cot 25-normalized of Homo sapiens (human) P
CR597942.1 full-length cDNA clone CS0DE008YI13 of Placenta of Homo sapiens (human) P
BC106010.1 Homo sapiens paired-like homeodomain 2, mRNA (cDNA clone MGC:111022 IMAGE:3914727), complete cds PA
BC013998.2 Homo sapiens paired-like homeodomain 2, mRNA (cDNA clone MGC:20144 IMAGE:3937807), complete cds PA
AK291591.1 Homo sapiens cDNA FLJ77320 complete cds, highly similar to Homo sapiens paired-like homeodomain transcription factor 2 (PITX2), transcript variant 1, mRNA
AK313987.1 Homo sapiens cDNA, FLJ94639, Homo sapiens paired-like homeodomain transcription factor 2(PITX2), transcript variant 3, mRNA
U69961.1 Homo sapiens solurshin (RGS) mRNA, complete cds PA
NM_153427.1 Homo sapiens paired-like homeodomain 2 (PITX2), transcript variant 1, mRNA PA
NM_153426.1 Homo sapiens paired-like homeodomain 2 (PITX2), transcript variant 2, mRNA PA

EST sequences (10 of 124) [Show all sequences]

AA977103.1 Clone IMAGE:1587251 uncharacterized tissue 3' read
AI015284.1 Clone IMAGE:1641235 testis 3' read
AI056031.1 Clone IMAGE:1659348 embryonic tissue 3' read
AI057086.1 Clone IMAGE:1676192 embryonic tissue 3' read
BX092458.1 Clone IMAGp998K05219_;_IMAGE:145660 placenta A
AI203538.1 Clone IMAGE:1732419 heart 3' read
AI368097.1 Clone IMAGE:1873875 intestine 3' read
AI376146.1 Clone IMAGE:2048363 embryonic tissue 3' read
AI783620.1 Clone IMAGE:2296724 kidney 3' read
BX280659.1 Clone IMAGp998B2312207_;_IMAGE:5529142 uterus P


Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria

 
NLM | NIH | UniGene | Privacy Statement | Disclaimer | NCBI Help