B-cell CLL/lymphoma 6, Homo sapiens

Expression Profile:

View expression levels using UniGene's EST ProfileViewer
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Highly represented (1.5 pct) in cDNA library dbEST:7730, HT0968.

Highly represented (1.2 pct) in cDNA library dbEST:8098, MT0259.

GEO profiles:

Gene expression profiles in the NCBI Gene Expression Omnibus database

cDNA Sources:

brain; muscle; blood; mixed; uterus; testis; adipose tissue; intestine; bladder; larynx; placenta; skin; amniotic fluid; trachea; embryonic tissue; thymus; lung; mouth; uncharacterized tissue; lymph node; mammary gland; pancreas; connective tissue; prostate; eye; liver; lymph; heart; ovary; kidney; stomach; pituitary gland; nerve; cervix; parathyroid; vascular; spleen; bone; adrenal gland

NCBI

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Finding cDNAs

UGID:693747 UniGene Hs.478588 Homo sapiens (human) BCL6

Order cDNA clone, Links

B-cell CLL/lymphoma 6 (BCL6)

SELECTED PROTEIN SIMILARITIES

Comparison of sequences in UniGene with selected protein reference sequences. The alignments can suggest function of a gene.

Reference Protein		Species	Id(%)	Len(aa)
NP_001124317.1	B-cell lymphoma 6 protein isoform 1	H. sapiens	100.0	705
XP_001158579.1	PREDICTED: B-cell lymphoma 6 protein isoform 3	P. troglodytes	99.9	705
NP_033874.1	B-cell leukemia/lymphoma 6	M. musculus	97.2	706
NP_001088538.1	hypothetical protein LOC495412	X. laevis	82.8	696
NP_957028.1	B-cell lymphoma 6 protein	D. rerio	78.8	703

GENE EXPRESSION

Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.

MAPPING POSITION

Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.

Chromosome:	3
Map position:	3q27
UniSTS entry:	Chr 3	RH70520
UniSTS entry:	Chr 3	STS-W46183
UniSTS entry:	Chr 3	SHGC-64334
UniSTS entry:	Chr 3	SHGC-77610
UniSTS entry:	Chr 3	(n/a)
UniSTS entry:	Chr 3	RH69801
UniSTS entry:	Chr 3	SHGC-34056
UniSTS entry:	Chr 3	PMC309637P2
UniSTS entry:	Chr 3	SHGC-77640

SEQUENCES

Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (14)

NM_001706.3	Homo sapiens B-cell CLL/lymphoma 6 (BCL6), transcript variant 1, mRNA	PA
U00115.1	Human zinc-finger protein (bcl-6) mRNA, complete cds	PA
BC142705.1	Homo sapiens B-cell CLL/lymphoma 6, mRNA (cDNA clone MGC:165045 IMAGE:40148809), complete cds	PA
BC146796.1	Homo sapiens cDNA clone IMAGE:8860299, containing frame-shift errors	PA
BC150184.1	Homo sapiens B-cell CLL/lymphoma 6, mRNA (cDNA clone MGC:164962 IMAGE:40148297), complete cds	PA
AK308162.1	Homo sapiens cDNA, FLJ98110	P
AL713713.1	Homo sapiens mRNA; cDNA DKFZp667A1115 (from clone DKFZp667A1115)	A
AK090890.1	Homo sapiens cDNA FLJ33571 fis, clone BRAMY2010395
AL832990.1	Homo sapiens mRNA; cDNA DKFZp666G163 (from clone DKFZp666G163)
AK304325.1	Homo sapiens cDNA FLJ60220 complete cds, highly similar to B-cell lymphoma 6 protein	P
NM_001130845.1	Homo sapiens B-cell CLL/lymphoma 6 (BCL6), transcript variant 2, mRNA	PA
EU883531.1	Homo sapiens zinc finger transcription factor BCL6S (BCL6) mRNA, complete cds, alternatively spliced	P
NM_001134738.1	Homo sapiens B-cell CLL/lymphoma 6 (BCL6), transcript variant 3, mRNA	PA
Z21943.1	H.sapiens mRNA for zinc finger protein	P

EST sequences (10 of 376) [Show all sequences]

R14390.1	Clone IMAGE:28938	brain	5' read	P
AA989511.1	Clone IMAGE:1606290	kidney	3' read
AI080223.1	Clone IMAGE:1677375	mixed	3' read	A
AI090269.1	Clone IMAGE:1697612	uterus	3' read	A
AA923378.1	Clone IMAGE:1526521	mixed	3' read
CB049506.1	Clone IMAGE:3271316	prostate	5' read	A
CB049505.1	Clone IMAGE:3271316	prostate	3' read	A
CB050312.1	Clone IMAGE:3271739	prostate	3' read	A
CB050313.1	Clone IMAGE:3271739	prostate	5' read	A
BX111046.1	Clone IMAGp998D04269_;_IMAGE:44787	brain		P

Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria