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Finding cDNAs
UGID:140689     UniGene Hs.82916     Homo sapiens (human)   CCT6A Order cDNA clone, Links
Chaperonin containing TCP1, subunit 6A (zeta 1) (CCT6A)
SELECTED PROTEIN SIMILARITIES
Comparison of sequences in UniGene with selected protein reference sequences. The alignments can suggest function of a gene.
Reference ProteinSpeciesId(%)Len(aa)
XP_519107.2 PREDICTED: chaperonin containing TCP1, subunit 6A isoform 10 P. troglodytes 100.0 530
NP_001753.1 chaperonin containing TCP1, subunit 6A isoform a H. sapiens 100.0 530
XP_001090105.1 PREDICTED: similar to chaperonin containing TCP1, subunit 6A isoform a isoform 2 M. mulatta 99.8 530
NP_033968.1 chaperonin containing Tcp1, subunit 6a M. musculus 98.3 530
NP_001086080.1 MGC81949 protein X. laevis 92.8 530
NP_958447.1 chaperonin containing TCP1, subunit 6A (zeta 1) D. rerio 92.7 530
NP_573066.1 lethal (1) G0022 CG8231-PA D. melanogaster 77.9 532
NP_741153.1 Chaperonin Containing TCP-1 family member (cct-6) C. elegans 75.9 535
XP_330359.1 hypothetical protein N. crassa 73.9 533
NP_186902.1 chaperonin, putative A. thaliana 71.9 533
XP_001694510.1 T-complex protein, zeta subunit C. reinhardtii 70.3 544
NP_010474.1 Subunit of the cytosolic chaperonin Cct ring complex, related to Tcp1p, essential protein that is required for the assembly of actin and tubulins in vivo; contains an ATP-binding motif; Cct6p S. cerevisiae 67.3 542

GENE EXPRESSION
Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.
Expression Profile: View expression levels using UniGene's EST ProfileViewer
[Show more entries with profiles like this]
Note: Highly represented (2.9 pct) in cDNA library dbEST:4205, UM0067.
Note: Highly represented (2.2 pct) in cDNA library dbEST:3323, HT0205.
Note: Highly represented (1.2 pct) in cDNA library dbEST:3676, ST0303.
GEO profiles: Gene expression profiles in the NCBI Gene Expression Omnibus database
cDNA Sources: brain; embryonic tissue; skin; uterus; eye; lung; liver; placenta; uncharacterized tissue; testis; kidney; prostate; pancreas; intestine; lymph; mixed; stomach; lymph node; muscle; bone; heart; thymus; ear; ascites; bone marrow; connective tissue; blood; adipose tissue; mammary gland; ovary; cervix; pituitary gland; spleen; mouth; parathyroid; esophagus; pharynx; bladder; adrenal gland; thyroid; vascular; tonsil; ganglia; nerve; umbilical cord; salivary gland; amniotic fluid; pineal gland
MAPPING POSITION
Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.
Chromosome: 7
Map position: 7p11.2
UniSTS entry: Chr 7 RH11537
UniSTS entry: Chr 7 G62070
UniSTS entry: Chr 7 SHGC-32082
UniSTS entry: Chr 7 WI-19011 [Map Viewer]
UniSTS entry: Chr Y D10S16
SEQUENCES
Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (22)

NM_001762.3 Homo sapiens chaperonin containing TCP1, subunit 6A (zeta 1) (CCT6A), transcript variant 1, mRNA PA
CR626783.1 full-length cDNA clone CS0DI041YD16 of Placenta Cot 25-normalized of Homo sapiens (human) P
CR626775.1 full-length cDNA clone CS0DA007YG12 of Neuroblastoma of Homo sapiens (human) P
CR613031.1 full-length cDNA clone CS0CAP002YC11 of Thymus of Homo sapiens (human) P
CR612852.1 full-length cDNA clone CS0DJ006YC24 of T cells (Jurkat cell line) Cot 10-normalized of Homo sapiens (human) P
CR609340.1 full-length cDNA clone CS0DI017YF17 of Placenta Cot 25-normalized of Homo sapiens (human) P
CR605318.1 full-length cDNA clone CS0DK005YG19 of HeLa cells Cot 25-normalized of Homo sapiens (human) P
CR600067.1 full-length cDNA clone CS0DI011YA10 of Placenta Cot 25-normalized of Homo sapiens (human) P
CR594866.1 full-length cDNA clone CS0DI064YE16 of Placenta Cot 25-normalized of Homo sapiens (human) P
CR590985.1 full-length cDNA clone CS0DJ003YB18 of T cells (Jurkat cell line) Cot 10-normalized of Homo sapiens (human) P
NM_001009186.1 Homo sapiens chaperonin containing TCP1, subunit 6A (zeta 1) (CCT6A), transcript variant 2, mRNA PA
AB209728.1 Homo sapiens mRNA for chaperonin containing TCP1, subunit 6A isoform a variant protein P
M94083.1 Human chaperonin-like protein (HTR3) mRNA, complete cds P
BC106942.1 Homo sapiens chaperonin containing TCP1, subunit 6A (zeta 1), mRNA (cDNA clone MGC:126215 IMAGE:40034021), complete cds P
BC106941.1 Homo sapiens chaperonin containing TCP1, subunit 6A (zeta 1), mRNA (cDNA clone IMAGE:40034020) P
L27706.1 Human chaperonin protein (Tcp20) gene complete cds P
AM295155.1 Homo sapiens partial mRNA for chaperonin subunit 6A (CCT6A gene) P
AF385084.1 Homo sapiens heat shock protein mRNA, complete cds PA
AK313819.1 Homo sapiens cDNA, FLJ94440, highly similar to Homo sapiens chaperonin containing TCP1, subunit 6A (zeta 1)(CCT6A), mRNA P
AK298371.1 Homo sapiens cDNA FLJ52344 complete cds, highly similar to T-complex protein 1 subunit zeta P
AK297751.1 Homo sapiens cDNA FLJ53065 complete cds, highly similar to T-complex protein 1 subunit zeta P
AB063318.1 Homo sapiens MoDP-2, MoDP-3 mRNA for acute morphine dependence related protein 2, acute morphine dependence related peptide 3, complete cds PA

EST sequences (10 of 1364) [Show all sequences]

AA962825.1 Clone IMAGE:1573731 kidney 3' read A
AA970264.1 Clone IMAGE:1575200 kidney 3' read
AA970295.1 Clone IMAGE:1575237 kidney 3' read PA
AA971028.1 Clone IMAGE:1575298 kidney 3' read A
AA976826.1 Clone IMAGE:1588319 uncharacterized tissue 3' read A
AA977387.1 Clone IMAGE:1589060 kidney 3' read A
AA988867.1 Clone IMAGE:1602698 lung 3' read A
AA922069.1 Clone IMAGE:1543991 mixed 3' read PA
AI038021.1 Clone IMAGE:1657757 embryonic tissue 3' read A
AI056351.1 Clone IMAGE:1669054 brain 3' read A


Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria

 
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