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UGID:159170     UniGene Hs.180877     Homo sapiens (human)   H3F3B Order cDNA clone, Links
H3 histone, family 3B (H3.3B) (H3F3B)
SELECTED PROTEIN SIMILARITIES
Comparison of sequences in UniGene with selected protein reference sequences. The alignments can suggest function of a gene.
Reference ProteinSpeciesId(%)Len(aa)
XP_001474439.1 PREDICTED: hypothetical protein M. musculus 100.0 135
NP_446437.1 H3 histone, family 3B R. norvegicus 100.0 135
XP_001368225.1 PREDICTED: hypothetical protein M. domestica 100.0 135
XP_001623766.1 predicted protein N. vectensis 100.0 135
NP_509344.1 HIStone family member (his-71) C. elegans 100.0 135
XP_001949594.1 PREDICTED: similar to Histone H3.3B CG8989-PA A. pisum 100.0 135
XP_975889.1 PREDICTED: similar to Histone H3.3B CG8989-PA isoform 2 T. castaneum 100.0 135
NP_001091756.1 h3 histone family 3a B. mori 100.0 135
XP_001657554.1 histone H3.3 A. aegypti 100.0 135
XP_321242.1 AGAP001813-PA A. gambiae 100.0 135
XP_001867328.1 histone H3.3 type 2 C. quinquefasciatus 100.0 135
NP_511095.1 Histone H3.3B CG8989-PA, isoform A D. melanogaster 100.0 135
XP_001120696.1 PREDICTED: similar to H3 histone, family 3B A. mellifera 100.0 135
XP_001178736.1 PREDICTED: similar to H3.3 histone S. purpuratus 100.0 135
XP_002119783.1 PREDICTED: similar to Histone H3.3B CG8989-PA C. intestinalis 100.0 135
NP_956297.1 H3 histone, family 3C D. rerio 100.0 135
NP_001080065.1 H3 histone, family 3B (H3.3B) X. laevis 100.0 135
NP_989026.1 H3 histone, family 3B (H3.3B) X. tropicalis 100.0 135
NP_990627.1 H3 histone, family 3B (H3.3B) G. gallus 100.0 135
XP_001514538.1 PREDICTED: hypothetical protein O. anatinus 100.0 135
XP_001091581.1 PREDICTED: similar to H3 histone, family 3B isoform 1 M. mulatta 100.0 135
NP_002098.1 H3 histone, family 3A H. sapiens 100.0 135
XP_537232.1 PREDICTED: similar to H3 histone, family 3B isoform 1 C. lupus familiaris 100.0 135
XP_001495110.1 PREDICTED: similar to Histone H3.3B CG8989-PA isoform 1 E. caballus 100.0 135
NP_999095.1 histone H3.3A S. scrofa 100.0 135
NP_001014411.1 H3 histone, family 3A B. taurus 100.0 135
NP_001078517.1 histone H3.2 A. thaliana 97.1 135
XP_328074.1 HISTONE H3 N. crassa 96.3 135
NP_009564.1 One of two identical histone H3 proteins (see also HHT2); core histone required for chromatin assembly, involved in heterochromatin-mediated telomeric and HM silencing; regulated by acetylation, methylation, and mitotic phosphorylation; Hht1p S. cerevisiae 95.6 135
XP_001690671.1 histone H3 C. reinhardtii 95.6 134

GENE EXPRESSION
Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.
Expression Profile: View expression levels using UniGene's EST ProfileViewer
[Show more entries with profiles like this]
Note: Highly represented in several libraries
GEO profiles: Gene expression profiles in the NCBI Gene Expression Omnibus database
cDNA Sources: brain; lung; pharynx; pancreas; uterus; embryonic tissue; skin; uncharacterized tissue; placenta; eye; blood; testis; mixed; liver; prostate; mammary gland; intestine; kidney; bone marrow; ovary; heart; stomach; bone; muscle; ascites; connective tissue; lymph node; salivary gland; lymph; cervix; tonsil; vascular; thymus; spleen; ear; bladder; adrenal gland; pituitary gland; thyroid; parathyroid; adipose tissue; larynx; umbilical cord; pineal gland; esophagus; mouth; spinal cord; nerve; epididymis; amniotic fluid; ganglia; trachea
MAPPING POSITION
Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.
Chromosome: 17
Map position: 17q25
UniSTS entry: Chr 17 RH47096
UniSTS entry: Chr 17 RH16041
UniSTS entry: Chr 17 G59779
UniSTS entry: Chr 17 G43578
UniSTS entry: Chr 17 RH11839
SEQUENCES
Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (51)

BX537379.1 Homo sapiens mRNA; cDNA DKFZp686C2282 (from clone DKFZp686C2282); complete cds PA
BX647280.1 Homo sapiens mRNA; cDNA DKFZp686O0399 (from clone DKFZp686O0399) PA
AK130772.1 Homo sapiens cDNA FLJ27262 fis, clone TMS00164, highly similar to Histone H3.3 P
NM_005324.3 Homo sapiens H3 histone, family 3B (H3.3B) (H3F3B), mRNA PA
CR625547.1 full-length cDNA clone CS0DE012YL05 of Placenta of Homo sapiens (human) P
CR625366.1 full-length cDNA clone CS0DH005YI03 of T cells (Jurkat cell line) of Homo sapiens (human) P
CR624690.1 full-length cDNA clone CS0DE004YI03 of Placenta of Homo sapiens (human) P
CR622957.1 full-length cDNA clone CS0DE006YC06 of Placenta of Homo sapiens (human) P
CR622564.1 full-length cDNA clone CS0DA002YH10 of Neuroblastoma of Homo sapiens (human)
CR622202.1 full-length cDNA clone CS0DE003YA03 of Placenta of Homo sapiens (human) P
CR621264.1 full-length cDNA clone CL0BB021ZE03 of Neuroblastoma of Homo sapiens (human) P
CR621009.1 full-length cDNA clone CS0DE001YA04 of Placenta of Homo sapiens (human) P
CR619729.1 full-length cDNA clone CS0DI063YP17 of Placenta Cot 25-normalized of Homo sapiens (human) P
CR618082.1 full-length cDNA clone CS0DE011YH03 of Placenta of Homo sapiens (human) P
CR618076.1 full-length cDNA clone CS0DF018YL21 of Fetal brain of Homo sapiens (human) P
CR617433.1 full-length cDNA clone CS0DM006YD06 of Fetal liver of Homo sapiens (human) P
CR616111.1 full-length cDNA clone CS0DG006YK08 of B cells (Ramos cell line) of Homo sapiens (human) P
CR615382.1 full-length cDNA clone CS0DJ009YB13 of T cells (Jurkat cell line) Cot 10-normalized of Homo sapiens (human) P
CR614120.1 full-length cDNA clone CS0DM009YB13 of Fetal liver of Homo sapiens (human) P
CR613143.1 full-length cDNA clone CS0DF008YF02 of Fetal brain of Homo sapiens (human) P
CR612972.1 full-length cDNA clone CS0CAP005YM21 of Thymus of Homo sapiens (human)
CR611244.1 full-length cDNA clone CS0DI006YH08 of Placenta Cot 25-normalized of Homo sapiens (human) P
CR610507.1 full-length cDNA clone CS0DI025YC18 of Placenta Cot 25-normalized of Homo sapiens (human) P
CR608885.1 full-length cDNA clone CS0DI064YB22 of Placenta Cot 25-normalized of Homo sapiens (human) P
CR606388.1 full-length cDNA clone CS0DA004YO19 of Neuroblastoma of Homo sapiens (human) P
CR605171.1 full-length cDNA clone CS0DI042YA06 of Placenta Cot 25-normalized of Homo sapiens (human) P
CR604778.1 full-length cDNA clone CS0DA005YH15 of Neuroblastoma of Homo sapiens (human) P
CR603889.1 full-length cDNA clone CS0DI076YG04 of Placenta Cot 25-normalized of Homo sapiens (human)
CR603793.1 full-length cDNA clone CS0DF028YI22 of Fetal brain of Homo sapiens (human) P
CR603175.1 full-length cDNA clone CS0DF034YH19 of Fetal brain of Homo sapiens (human) P
CR602780.1 full-length cDNA clone CS0CAP001YD17 of Thymus of Homo sapiens (human) P
CR602581.1 full-length cDNA clone CS0DF019YC21 of Fetal brain of Homo sapiens (human) P
CR602412.1 full-length cDNA clone CS0DE003YE19 of Placenta of Homo sapiens (human) P
CR599200.1 full-length cDNA clone CS0DF036YM14 of Fetal brain of Homo sapiens (human) P
CR597711.1 full-length cDNA clone CS0DE011YN21 of Placenta of Homo sapiens (human) PA
CR595774.1 full-length cDNA clone CS0DA001YB14 of Neuroblastoma of Homo sapiens (human) P
CR595544.1 full-length cDNA clone CS0DN001YG04 of Adult brain of Homo sapiens (human) P
CR595062.1 full-length cDNA clone CS0DN001YL06 of Adult brain of Homo sapiens (human) P
CR591461.1 full-length cDNA clone CS0DI020YI08 of Placenta Cot 25-normalized of Homo sapiens (human)
CR591387.1 full-length cDNA clone CS0DE003YK12 of Placenta of Homo sapiens (human) P
BC108701.1 Homo sapiens H3 histone, family 3B (H3.3B), mRNA (cDNA clone MGC:131844 IMAGE:6144255), complete cds PA
AF218029.1 Homo sapiens clone PP781 unknown mRNA PA
BC001124.2 Homo sapiens H3 histone, family 3B (H3.3B), mRNA (cDNA clone MGC:2161 IMAGE:2988279), complete cds PA
BC006497.2 Homo sapiens H3 histone, family 3B (H3.3B), mRNA (cDNA clone MGC:2160 IMAGE:2959756), complete cds PA
BC012813.2 Homo sapiens H3 histone, family 3B (H3.3B), mRNA (cDNA clone MGC:4123 IMAGE:2959756), complete cds PA
AK054591.1 Homo sapiens cDNA FLJ30029 fis, clone 3NB692001334
BC017558.1 Homo sapiens H3 histone, family 3B (H3.3B), mRNA (cDNA clone MGC:9614 IMAGE:3910031), complete cds PA
AK312762.1 Homo sapiens cDNA, FLJ93172, highly similar to Homo sapiens H3 histone, family 3B (H3.3B) (H3F3B), mRNA P
AK304607.1 Homo sapiens cDNA FLJ52843 complete cds, highly similar to Histone H3.3 P
BC020466.1 Homo sapiens H3 histone, family 3B (H3.3B), mRNA (cDNA clone IMAGE:3870030) PA
L05088.1 Homo sapiens histone H3.3 mRNA, 3' untranslated region

EST sequences (10 of 4040) [Show all sequences]

AA954729.1 Clone IMAGE:1572888 kidney 3' read A
AA865980.1 Clone IMAGE:1470249 uncharacterized tissue 3' read
AA968761.1 Clone IMAGE:1597429 uncharacterized tissue 3' read
AA971497.1 Clone IMAGE:1584370 lung 3' read A
AA973674.1 Clone IMAGE:1568984 lung 3' read A
AA974852.1 Clone IMAGE:1567744 lung 3' read A
AA988234.1 Clone IMAGE:1604784 lung 3' read A
AA993668.1 Clone IMAGE:1623623 embryonic tissue 3' read A
AA994288.1 Clone IMAGE:1631211 mammary gland 3' read P
AA902835.1 Clone IMAGE:1519525 uncharacterized tissue 3' read P


Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria

 
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