Phosphodiesterase 6A, cGMP-specific, rod, alpha, Homo sapiens

Restricted Expression:

adult [show more like this]

Expression Profile:

View expression levels using UniGene's EST ProfileViewer
[Show more entries with profiles like this]

Highly represented (1.4 pct) in cDNA library dbEST:432, Human retina cDNA Tsp509I-cleaved sublibrary.

GEO profiles:

Gene expression profiles in the NCBI Gene Expression Omnibus database

cDNA Sources:

eye; muscle; skin; brain; mixed; uncharacterized tissue; testis; uterus; lung; bone

NCBI

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Finding cDNAs

UGID:1782803 UniGene Hs.567314 Homo sapiens (human) PDE6A

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Phosphodiesterase 6A, cGMP-specific, rod, alpha (PDE6A)

SELECTED PROTEIN SIMILARITIES

Comparison of sequences in UniGene with selected protein reference sequences. The alignments can suggest function of a gene.

Reference Protein		Species	Id(%)	Len(aa)
NP_001099494.1	phosphodiesterase 6B, cGMP, rod receptor, beta polypeptide	R. norvegicus	80.8	853

GENE EXPRESSION

Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.

MAPPING POSITION

Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.

	Chromosome:	5
	Map position:	5q31.2-q34

SEQUENCES

Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (5)

BX537592.1	Homo sapiens mRNA; cDNA DKFZp686P1285 (from clone DKFZp686P1285)	A
BX648986.1	Homo sapiens mRNA; cDNA DKFZp686G1084 (from clone DKFZp686G1084)	PA
NM_000440.2	Homo sapiens phosphodiesterase 6A, cGMP-specific, rod, alpha (PDE6A), mRNA	A
M26061.1	Human cGMP phosphodiesterase alpha subunit (CGPR-A) mRNA, complete cds	P
BC035909.1	Homo sapiens phosphodiesterase 6A, cGMP-specific, rod, alpha, mRNA (cDNA clone MGC:46181 IMAGE:5492027), complete cds	PA

EST sequences (10 of 106) [Show all sequences]

AI221148.1	Clone IMAGE:1842541	mixed	3' read	P
AA897360.1	Clone IMAGE:1466078	mixed	3' read
BX283765.1	Clone IMAGp958L211413_;_IMAGE:4643492	skin		P
BX490591.1	Clone DKFZp686H1484	muscle	5' read	P
BX490874.1	Clone DKFZp686G1692	muscle	5' read	P
BX490974.1	Clone DKFZp686M2092	muscle	5' read	P
BX491111.1	Clone DKFZp686K1394	muscle	5' read
BX491244.1	Clone DKFZp686F1797	muscle	5' read	P
BX491279.1	Clone DKFZp686I0197	muscle	5' read	P
BX491320.1	Clone DKFZp686L1097	muscle	5' read	P

Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria