Transcribed locus, strongly similar to NP_058944.1 heterogeneous nuclear ribonucleoprotein A1 [Rattus norvegicus], Homo sapiens

Expression Profile:

View expression levels using UniGene's EST ProfileViewer
[Show more entries with profiles like this]

Highly represented (1.3 pct) in cDNA library dbEST:3977, HT0487.

GEO profiles:

Gene expression profiles in the NCBI Gene Expression Omnibus database

cDNA Sources:

embryonic tissue; uncharacterized tissue; lung; brain; skin; uterus; eye; intestine; placenta; prostate; liver; lymph; ovary; thyroid; mixed; bone; kidney; bladder; bone marrow; adipose tissue; mammary gland; pancreas; connective tissue; adrenal gland; esophagus; stomach; cervix; testis; muscle; blood; mouth; larynx; tonsil; ear; ganglia; salivary gland; thymus; vascular; pituitary gland; heart; ascites; spleen; nerve; umbilical cord; pharynx; lymph node

NCBI

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UGID:195578 UniGene Hs.356721 Homo sapiens (human)

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Transcribed locus, strongly similar to NP_058944.1 heterogeneous nuclear ribonucleoprotein A1 [Rattus norvegicus]

SELECTED PROTEIN SIMILARITIES

Comparison of sequences in UniGene with selected protein reference sequences. The alignments can suggest function of a gene.

Reference Protein		Species	Id(%)	Len(aa)
XP_001481195.1	PREDICTED: similar to heterogeneous nuclear ribonucleoprotein A1	M. musculus	100.0	319
NP_058944.1	heterogeneous nuclear ribonucleoprotein A1	R. norvegicus	100.0	319
XP_001163262.1	PREDICTED: similar to Heterogeneous nuclear ribonucleoprotein A1 (Helix-destabilizing protein) (Single-strand RNA-binding protein) (hnRNP core protein A1) isoform 1	P. troglodytes	100.0	319
NP_002127.1	heterogeneous nuclear ribonucleoprotein A1 isoform a	H. sapiens	100.0	319
NP_001070686.1	heterogeneous nuclear ribonucleoprotein A1	S. scrofa	100.0	319
NP_001039376.1	heterogeneous nuclear ribonucleoprotein A1	B. taurus	100.0	319
XP_001082821.1	PREDICTED: heterogeneous nuclear ribonucleoprotein A1 isoform 2	M. mulatta	100.0	305
XP_856107.1	PREDICTED: similar to Heterogeneous nuclear ribonucleoprotein A1 (Helix-destabilizing protein) (Single-strand binding protein) (hnRNP core protein A1) (HDP-1) (Topoisomerase-inhibitor suppressed) isoform 5	C. lupus familiaris	100.0	305
NP_001081282.1	ribonucleoprotein A1a	X. laevis	86.6	364
NP_956789.1	hypothetical protein LOC393467	D. rerio	77.8	387
NP_733250.1	Heterogeneous nuclear ribonucleoprotein at 98DE CG9983-PE, isoform E	D. melanogaster	56.9	345
NP_001040945.1	human HnRNP A1 homolog family member (hrp-1)	C. elegans	53.6	344

GENE EXPRESSION

Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.

MAPPING POSITION

Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.

Chromosome:	16
UniSTS entry:	Chr 9	(n/a)
UniSTS entry:	Chr 8	SHGC-2501
UniSTS entry:	Chr 8	REN98750
UniSTS entry:	Chr 8	REN98749

SEQUENCES

Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

EST sequences (10 of 958) [Show all sequences]

AA954113.1	Clone IMAGE:1591242	kidney	3' read	P
AA864818.1	Clone IMAGE:1460060	kidney	3' read	P
AA974640.1	Clone IMAGE:1574368	kidney	3' read
AA985488.1	Clone IMAGE:1592922	kidney	3' read
AI002614.1	Clone IMAGE:1610521	uncharacterized tissue	3' read
CB145872.1	Clone L16HLK3-10-A04	liver	5' read	P
CB112686.1	Clone L6ChoCK0-6-D04	liver	5' read	P
CB127507.1	Clone C1SNU17-20-H06	cervix	5' read	P
CB135369.1	Clone L14ChoiCK0-26-F08	liver	5' read	P
CB148049.1	Clone L9SNU354-17-C04	liver	5' read	P

Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria