NCBI UniGene banner graphic
PubMed Nucleotide Protein Genome Structure Popset Taxonomy
 Search
NCBI

UniGene
Homepage
FAQs
Query Tips
Library Browser
DDD
Download UniGene

Related Databases
Gene
HomoloGene
dbEST
Trace Archive

NIH cDNA Projects
MGC | ZGC | XGC
Finding cDNAs
UGID:179793     UniGene Hs.293653     Homo sapiens (human)   RPL17 Order cDNA clone, Links
HCG39912 (RPL17)
SELECTED PROTEIN SIMILARITIES
Comparison of sequences in UniGene with selected protein reference sequences. The alignments can suggest function of a gene.
Reference ProteinSpeciesId(%)Len(aa)
XP_001474782.1 PREDICTED: similar to Ac2-210 isoform 1 M. musculus 100.0 183
NP_001070168.1 ribosomal protein L17 T. guttata 100.0 183
XP_001170416.1 PREDICTED: hypothetical protein isoform 1 P. troglodytes 100.0 183
NP_001030178.1 ribosomal protein L17 H. sapiens 100.0 183
XP_861376.1 PREDICTED: similar to 60S ribosomal protein L17 (L23) isoform 10 C. lupus familiaris 100.0 183
XP_001499165.1 PREDICTED: similar to Rpl17 protein isoform 1 E. caballus 100.0 183
NP_740782.1 Ribosomal Protein, Large subunit family member (rpl-17) C. elegans 70.1 156

GENE EXPRESSION
Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.
Expression Profile: View expression levels using UniGene's EST ProfileViewer
[Show more entries with profiles like this]
Note: Highly represented (1.9 pct) in cDNA library dbEST:4440, OT0078.
Note: Highly represented (1.5 pct) in cDNA library dbEST:6547, AN0036.
GEO profiles: Gene expression profiles in the NCBI Gene Expression Omnibus database
cDNA Sources: embryonic tissue; prostate; brain; testis; uncharacterized tissue; pineal gland; mixed; ovary; ear; mouth; connective tissue; lung; ascites; stomach; uterus; cervix; skin; muscle; kidney; mammary gland; pharynx; intestine; pancreas; lymph; bone; placenta; pituitary gland; blood; liver; spleen; thymus; vascular; heart; eye; umbilical cord; lymph node; thyroid; amniotic fluid; adrenal gland; tonsil; bone marrow; esophagus; trachea; salivary gland; ganglia
MAPPING POSITION
Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.
Chromosome: 1
Map position: 18q21
SEQUENCES
Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (6)

BC066323.1 Homo sapiens ribosomal protein L17, mRNA (cDNA clone MGC:87222 IMAGE:4797583), complete cds PA
CR599286.1 full-length cDNA clone CS0DL002YF04 of B cells (Ramos cell line) Cot 25-normalized of Homo sapiens (human) P
NM_001035006.1 Homo sapiens ribosomal protein L17 (RPL17), transcript variant 2, mRNA PA
NM_001093734.1 Homo sapiens hCG22804 (LOC645441), mRNA
BC017831.1 Homo sapiens ribosomal protein L17, mRNA (cDNA clone MGC:22482 IMAGE:4251433), complete cds PA
AK304659.1 Homo sapiens cDNA FLJ52184 complete cds, highly similar to 60S ribosomal protein L17 A

EST sequences (10 of 768) [Show all sequences]

AA970670.1 Clone IMAGE:1578993 mixed 3' read PA
AA971101.1 Clone IMAGE:1575343 kidney 3' read P
AA985501.1 Clone IMAGE:1592936 kidney 3' read PA
AA985631.1 Clone IMAGE:1593049 kidney 3' read P
AA834236.1 Clone IMAGE:1421302 kidney P
AI002516.1 Clone IMAGE:1594246 kidney 3' read P
AI081292.1 Clone IMAGE:1637523 uncharacterized tissue 3' read PA
AI215636.1 Clone IMAGE:1883693 lung 3' read PA
AI199412.1 Clone IMAGE:1943966 prostate 3' read A
CB162886.1 Clone L18POOL1n1-41-F05 liver 5' read P


Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria

 
NLM | NIH | UniGene | Privacy Statement | Disclaimer | NCBI Help