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Finding cDNAs
UGID:172556     UniGene Hs.268939     Homo sapiens (human)   MATR3 Order cDNA clone, Links
Matrin 3 (MATR3)
SELECTED PROTEIN SIMILARITIES
Comparison of sequences in UniGene with selected protein reference sequences. The alignments can suggest function of a gene.
Reference ProteinSpeciesId(%)Len(aa)
XP_863994.1 PREDICTED: similar to Matrin 3 isoform 2 C. lupus familiaris 99.8 848

GENE EXPRESSION
Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.
Expression Profile: View expression levels using UniGene's EST ProfileViewer
[Show more entries with profiles like this]
Note: Highly represented (1.6 pct) in cDNA library dbEST:3989, PT0012.
Note: Highly represented (1.4 pct) in cDNA library dbEST:6319, FN0022.
Note: Highly represented (1.2 pct) in cDNA library dbEST:8269, NT0203.
GEO profiles: Gene expression profiles in the NCBI Gene Expression Omnibus database
cDNA Sources: brain; testis; embryonic tissue; muscle; uncharacterized tissue; uterus; liver; skin; kidney; eye; placenta; trachea; lung; prostate; mammary gland; intestine; mixed; connective tissue; bladder; thymus; pancreas; blood; bone marrow; amniotic fluid; vascular; lymph node; parathyroid; spinal cord; salivary gland; ascites; larynx; mouth; heart; stomach; cervix; thyroid; ovary; pharynx; bone; adrenal gland; spleen; pituitary gland; lymph; esophagus; adipose tissue; ear; ganglia; nerve; tonsil; umbilical cord; pineal gland
MAPPING POSITION
Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.
Chromosome: 5
Map position: 5q31.2
SEQUENCES
Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (24)

AB018266.1 Homo sapiens mRNA for KIAA0723 protein, partial cds P
BX537365.1 Homo sapiens mRNA; cDNA DKFZp686I0486 (from clone DKFZp686I0486) PA
AK001388.1 Homo sapiens cDNA FLJ10526 fis, clone NT2RP2000931, highly similar to Matrin-3 P
CR597092.1 full-length cDNA clone CS0DK010YO14 of HeLa cells Cot 25-normalized of Homo sapiens (human) P
CR749625.1 Homo sapiens mRNA; cDNA DKFZp686K23100 (from clone DKFZp686K23100) PA
CR749210.1 Homo sapiens mRNA; cDNA DKFZp686L22104 (from clone DKFZp686L22104) PA
AF117236.1 Homo sapiens matrin 3 mRNA, complete cds PA
CR936615.1 Homo sapiens mRNA; cDNA DKFZp686K0542 (from clone DKFZp686K0542) PA
NM_199189.1 Homo sapiens matrin 3 (MATR3), transcript variant 1, mRNA PA
AY007157.1 Homo sapiens clone CDABP0107 mRNA sequence P
NM_018834.4 Homo sapiens matrin 3 (MATR3), transcript variant 2, mRNA PA
BC015031.2 Homo sapiens matrin 3, mRNA (cDNA clone MGC:9105 IMAGE:3921668), complete cds PA
AK057645.1 Homo sapiens cDNA FLJ33083 fis, clone TRACH2000393, highly similar to Rattus norvegicus matrin 3 mRNA P
AK309195.1 Homo sapiens cDNA, FLJ99236
AK307872.1 Homo sapiens cDNA, FLJ97820
AK293952.1 Homo sapiens cDNA FLJ55637 complete cds, highly similar to Matrin-3
AK299399.1 Homo sapiens cDNA FLJ53172 complete cds, highly similar to Matrin-3
AL117541.1 Homo sapiens mRNA; cDNA DKFZp434I132 (from clone DKFZp434I132) A
AJ224167.1 Homo sapiens mRNA containing U19H snoRNA; mRNA 2
AJ224170.1 Homo sapiens mRNA containing U19H snoRNA; mRNA 5
AJ224169.1 Homo sapiens mRNA containing U19H snoRNA; mRNA 4 P
AJ224168.1 Homo sapiens mRNA containing U19H snoRNA; mRNA 3
BC036498.1 Homo sapiens matrin 3, mRNA (cDNA clone IMAGE:5264426), with apparent retained intron PA
M63483.1 Human major nuclear matrix protein mRNA P

EST sequences (10 of 2047) [Show all sequences]

AA862773.1 Clone IMAGE:1469166 uncharacterized tissue 3' read A
R14504.1 Clone IMAGE:29081 brain 5' read P
AA907718.1 Clone IMAGE:1505885 mixed 3' read A
AA994965.1 Clone IMAGE:1634965 kidney 3' read A
AI052668.1 Clone IMAGE:1675687 mixed 3' read
AI061406.1 Clone IMAGE:1700099 kidney 3' read A
AA947747.1 Clone IMAGE:1588084 uncharacterized tissue 3' read A
R22704.1 Clone IMAGE:31325 brain 5' read P
AI124652.1 Clone IMAGE:1539928 brain 3' read A
AI139005.1 Clone IMAGE:1736118 testis 3' read


Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria

 
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