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Finding cDNAs
UGID:257008     UniGene Mm.3077     Mus musculus (mouse)   Nr1i3 Order cDNA clone, Links
Nuclear receptor subfamily 1, group I, member 3 (Nr1i3)
SELECTED PROTEIN SIMILARITIES
Comparison of sequences in UniGene with selected protein reference sequences. The alignments can suggest function of a gene.
Reference ProteinSpeciesId(%)Len(aa)
XP_001173927.1 PREDICTED: nuclear receptor subfamily 1, group I, member 3 isoform 6 P. troglodytes 75.4 308
NP_003880.3 pregnane X receptor isoform 1 H. sapiens 48.7 398

GENE EXPRESSION
Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.
Expression Profile: View expression levels using UniGene's EST ProfileViewer
[Show more entries with profiles like this]
GEO profiles: Gene expression profiles in the NCBI Gene Expression Omnibus database
cDNA Sources: liver; brain; muscle; kidney; extraembryonic tissue; intestine; thymus; mammary gland; bone marrow; embryonic tissue; mixed; skin; uncharacterized tissue; heart; tongue; stomach; bladder; salivary gland; connective tissue
MAPPING POSITION
Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.
Chromosome: 1
Map position: 1 H3|1 92.6 cM
SEQUENCES
Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (15)

AK208296.1 Mus musculus cDNA, clone:Y2G0110L11, strand:minus, reference:ENSEMBL:Mouse-Transcript-ENST:ENSMUST00000005817, based on BLAT search
AK178629.1 Mus musculus cDNA, clone:Y0G0107G11, strand:minus, reference:ENSEMBL:Mouse-Transcript-ENST:ENSMUST00000005817, based on BLAT search
AK178498.1 Mus musculus cDNA, clone:Y0G0106P17, strand:minus, reference:ENSEMBL:Mouse-Transcript-ENST:ENSMUST00000005817, based on BLAT search
AK178278.1 Mus musculus cDNA, clone:Y0G0106B13, strand:minus, reference:ENSEMBL:Mouse-Transcript-ENST:ENSMUST00000005817, based on BLAT search
AK177526.1 Mus musculus cDNA, clone:Y0G0103A16, strand:plus, reference:ENSEMBL:Mouse-Transcript-ENST:ENSMUST00000005817, based on BLAT search
AK177299.1 Mus musculus cDNA, clone:Y0G0102E21, strand:plus, reference:ENSEMBL:Mouse-Transcript-ENST:ENSMUST00000005817, based on BLAT search
BC089541.1 Mus musculus nuclear receptor subfamily 1, group I, member 3, mRNA (cDNA clone MGC:107281 IMAGE:30315989), complete cds PA
AK133515.1 Mus musculus 11 days pregnant adult female ovary and uterus cDNA, RIKEN full-length enriched library, clone:5033407J02 product:nuclear receptor subfamily 1, group I, member 3, full insert sequence P
AK140721.1 Mus musculus adult male corpus striatum cDNA, RIKEN full-length enriched library, clone:C030016B11 product:nuclear receptor subfamily 1, group I, member 3, full insert sequence
AK149430.1 Mus musculus adult male liver tumor cDNA, RIKEN full-length enriched library, clone:C730009H01 product:nuclear receptor subfamily 1, group I, member 3, full insert sequence P
AK149381.1 Mus musculus adult male liver tumor cDNA, RIKEN full-length enriched library, clone:C730003I01 product:nuclear receptor subfamily 1, group I, member 3, full insert sequence P
AF009327.1 Mus musculus orphan nuclear hormone receptor isoform mCAR1 mRNA, complete cds P
AF009328.1 Mus musculus orphan nuclear hormone receptor isoform mCAR2 mRNA, complete cds P
NM_009803.4 Mus musculus nuclear receptor subfamily 1, group I, member 3 (Nr1i3), mRNA
BC037645.1 Mus musculus nuclear receptor subfamily 1, group I, member 3, mRNA (cDNA clone IMAGE:5052215), complete cds PA

EST sequences (10 of 88) [Show all sequences]

BY083730.1 Clone K630045A05 liver 5' read
BY101462.1 Clone K630139A15 liver 5' read
BY103546.1 Clone K630151G17 liver 5' read
BY372092.1 Clone G430117B19 kidney 3' read
BY417589.1 Clone I920028K09 kidney 3' read
BY437635.1 Clone I920153E07 kidney 3' read
BY450386.1 Clone K630045A05 liver 3' read
BY450676.1 Clone K630046M12 extraembryonic tissue 3' read
BY459220.1 Clone K630111H13 intestine 3' read
BY461833.1 Clone K630131B21 heart 3' read


Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria

 
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