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Finding cDNAs
UGID:343719     UniGene Mm.257073     Mus musculus (mouse)   Chn1 Links
Chimerin (chimaerin) 1 (Chn1)
SELECTED PROTEIN SIMILARITIES
Comparison of sequences in UniGene with selected protein reference sequences. The alignments can suggest function of a gene.
Reference ProteinSpeciesId(%)Len(aa)
NP_083992.1 chimerin (chimaerin) 1 isoform 2 M. musculus 100.0 209

GENE EXPRESSION
Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.
Expression Profile: View expression levels using UniGene's EST ProfileViewer
[Show more entries with profiles like this]
GEO profiles: Gene expression profiles in the NCBI Gene Expression Omnibus database
cDNA Sources: brain; embryonic tissue; eye; mixed; ovary; testis; joint; fertilized ovum; lung; pituitary gland; sympathetic ganglion; kidney; bone marrow; mammary gland; inner ear; uncharacterized tissue; intestine; spinal cord; nasopharynx; liver; connective tissue
MAPPING POSITION
Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.
Chromosome: 2
Map position: 2 C3
SEQUENCES
Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (19)

AK075606.1 Mus musculus adult male brain cDNA, RIKEN full-length enriched library, clone:0710001E19 product:N-CHIMAERIN (UNKNOWN) (PROTEIN FOR MGC:19150) homolog [Mus musculus], full insert sequence P
AK049943.1 Mus musculus adult male hippocampus cDNA, RIKEN full-length enriched library, clone:C630013I04 product:N-CHIMAERIN (NC) (N-CHIMERIN) (ALPHA CHIMERIN) (A-CHIMAERIN) homolog [Rattus norvegicus], full insert sequence P
AK032630.1 Mus musculus adult male olfactory brain cDNA, RIKEN full-length enriched library, clone:6432402G19 product:N-chimerin homolog [Rattus norvegicus], full insert sequence P
AK019340.1 Mus musculus adult male hippocampus cDNA, RIKEN full-length enriched library, clone:2900046J01 product:unclassifiable, full insert sequence
NM_175752.2 Mus musculus chimerin (chimaerin) 1 (Chn1), transcript variant 1, mRNA
BC054770.1 Mus musculus chimerin (chimaerin) 1, mRNA (cDNA clone MGC:65717 IMAGE:6415204), complete cds PA
AK147686.1 Mus musculus adult male brain UNDEFINED_CELL_LINE cDNA, RIKEN full-length enriched library, clone:M5C1107P18 product:chimerin (chimaerin) 1, full insert sequence P
AB264774.1 Mus musculus Chn1 mRNA for alpha3-chimerin, complete cds, wild type
AB264773.1 Mus musculus Chn1 pseudogene mRNA for alpha3-chimerin, mutant: mfy, MT transposon-like element inserted
AB264772.1 Mus musculus Chn1 mRNA for alpha2-chimerin, complete cds, mutant: mfy
AB264771.1 Mus musculus Chn1 mRNA for alpha1-chimerin, complete cds, mutant: mfy
NM_001113246.1 Mus musculus chimerin (chimaerin) 1 (Chn1), transcript variant 3, mRNA A
AK007182.1 Mus musculus adult male testis cDNA, RIKEN full-length enriched library, clone:1700112L09 product:hypothetical RhoGAP domain containing protein, full insert sequence P
NM_029716.2 Mus musculus chimerin (chimaerin) 1 (Chn1), transcript variant 2, mRNA
BC010825.1 Mus musculus chimerin (chimaerin) 1, mRNA (cDNA clone MGC:19150 IMAGE:4219273), complete cds PA
AF332070.1 n-chimaerin [Mus musculus], mRNA sequence P
AF332069.1 n-chimaerin [Mus musculus], mRNA sequence P
BC024796.1 Mus musculus chimerin (chimaerin) 1, mRNA (cDNA clone MGC:38824 IMAGE:5360438), complete cds PA
BC025023.1 Mus musculus chimerin (chimaerin) 1, mRNA (cDNA clone MGC:39019 IMAGE:5364554), complete cds PA

EST sequences (10 of 525) [Show all sequences]

BY076511.1 Clone K630004K18 mixed 5' read
BY076999.1 Clone K630007H14 mixed 5' read
BY079717.1 Clone K630020L19 testis 5' read P
BY103817.1 Clone K630152J24 mixed 5' read
BY105973.1 Clone K630163H03 brain 5' read
BY237902.1 Clone K230004C18 brain 5' read
BY237920.1 Clone K230004E07 brain 5' read
BY239087.1 Clone K230010B13 brain 5' read
BY239161.1 Clone K230010H03 brain 5' read P
BY239349.1 Clone K230011G21 brain 5' read


Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria

 
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