CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase 1, Homo sapiens

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UGID:239505 UniGene Hs.444468 Homo sapiens (human) CTDSP1

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CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase 1 (CTDSP1)

SELECTED PROTEIN SIMILARITIES

Comparison of sequences in UniGene with selected protein reference sequences. The alignments can suggest function of a gene.

Reference Protein		Species	Id(%)	Len(aa)
XP_001477638.1	PREDICTED: similar to golli-interacting protein	M. musculus	99.6	260
NP_001121551.1	CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase 1	R. norvegicus	99.6	260
NP_005799.2	small CTD phosphatase 3 isoform 2	H. sapiens	83.9	261
NP_850809.1	NLI interacting factor (NIF) family protein	A. thaliana	52.2	228
NP_871854.1	SCP(Small C-terminal domain Phosphatase)-Like phosphatase family member (scpl-3)	C. elegans	49.0	190

GENE EXPRESSION

Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.

	Expression Profile:	View expression levels using UniGene's EST ProfileViewer [Show more entries with profiles like this]
	GEO profiles:	Gene expression profiles in the NCBI Gene Expression Omnibus database
	cDNA Sources:	placenta; lung; uncharacterized tissue; mixed; pituitary gland; eye; intestine; mammary gland; uterus; brain; prostate; kidney; embryonic tissue; thymus; cervix; stomach; pancreas; muscle; tonsil; connective tissue; bone marrow; ovary; adrenal gland; spleen; pharynx; bladder; skin; lymph node; blood; liver; ear; ascites; thyroid; salivary gland; heart; testis; nerve; ganglia; bone; adipose tissue; vascular; lymph; esophagus

MAPPING POSITION

Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.

	Chromosome:	2
	Map position:	2q35

SEQUENCES

Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (12)

AY279530.1	Homo sapiens small CTD phosphatase 1 splice variant mRNA, complete cds; alternatively spliced	P
AY279529.1	Homo sapiens small CTD phosphatase 1 mRNA, complete cds; alternatively spliced	P
NM_182642.1	Homo sapiens CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase 1 (CTDSP1), transcript variant 2, mRNA	P
CR598966.1	full-length cDNA clone CS0DI044YA07 of Placenta Cot 25-normalized of Homo sapiens (human)
CR598368.1	full-length cDNA clone CS0CAP007YJ11 of Thymus of Homo sapiens (human)
CR590321.1	full-length cDNA clone CS0DC007YN07 of Neuroblastoma Cot 25-normalized of Homo sapiens (human)
AF229162.1	Homo sapiens nuclear LIM interactor-interacting factor (NLI-IF) mRNA, complete cds	PA
AF217969.1	Homo sapiens clone PP1143 unknown mRNA	PA
NM_021198.1	Homo sapiens CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase 1 (CTDSP1), transcript variant 1, mRNA	PA
BC012977.2	Homo sapiens CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase 1, mRNA (cDNA clone MGC:15065 IMAGE:3687816), complete cds	PA
AF258582.1	Homo sapiens PP4664 mRNA, complete cds	PA
AK075090.1	Homo sapiens cDNA FLJ90609 fis, clone PLACE1001788	P

EST sequences (10 of 426) [Show all sequences]

AA970842.1	Clone IMAGE:1560925	mixed	3' read
AA995404.1	Clone IMAGE:1601605	lung	3' read
AA908835.1	Clone IMAGE:1522681	lung	3' read
AI002213.1	Clone IMAGE:1601362	lung	3' read
AI061456.1	Clone IMAGE:1700076	kidney	3' read
AI092365.1	Clone IMAGE:1692975	heart	3' read
AI092997.1	Clone IMAGE:1692445	heart	3' read
AA886908.1	Clone IMAGE:1476474	uncharacterized tissue	3' read
AI144305.1	Clone IMAGE:1672538	uncharacterized tissue	3' read
BX095079.1	Clone IMAGp998J24694_;_IMAGE:308855	lung

Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria