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UGID:724924     UniGene Hs.509765     Homo sapiens (human)   ACTN1 Order cDNA clone, Links
Actinin, alpha 1 (ACTN1)
SELECTED PROTEIN SIMILARITIES
Comparison of sequences in UniGene with selected protein reference sequences. The alignments can suggest function of a gene.
Reference ProteinSpeciesId(%)Len(aa)
XP_866940.1 PREDICTED: similar to actinin, alpha 1 isoform 7 C. lupus familiaris 99.7 922
NP_995988.1 karst CG12008-PB, isoform B D. melanogaster 52.6 483
NP_001024052.1 UNCoordinated family member (unc-70) C. elegans 51.8 550
NP_958780.1 plectin 1 isoform 2 H. sapiens 48.8 123

GENE EXPRESSION
Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.
Expression Profile: View expression levels using UniGene's EST ProfileViewer
[Show more entries with profiles like this]
Note: Highly represented in several libraries
GEO profiles: Gene expression profiles in the NCBI Gene Expression Omnibus database
cDNA Sources: brain; embryonic tissue; uterus; lung; skin; testis; intestine; kidney; uncharacterized tissue; placenta; pancreas; mammary gland; connective tissue; liver; mixed; mouth; prostate; eye; blood; thymus; trachea; muscle; cervix; stomach; ovary; bone; adrenal gland; nerve; vascular; pharynx; spleen; umbilical cord; heart; thyroid; parathyroid; amniotic fluid; bone marrow; bladder; salivary gland; ganglia; ear; lymph node; epididymis; ascites; adipose tissue; larynx; esophagus; pineal gland
MAPPING POSITION
Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.
Chromosome: 14
Map position: 14q24.1-q24.2|14q24|14q22-q24
SEQUENCES
Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (25)

BX248020.1 human full-length cDNA clone CS0DB009YA03 of Neuroblastoma of Homo sapiens (human) P
BT007207.1 Homo sapiens actinin, alpha 1 mRNA, complete cds P
BX641076.1 Homo sapiens mRNA; cDNA DKFZp686J22226 (from clone DKFZp686J22226) PA
AK124378.1 Homo sapiens cDNA FLJ42387 fis, clone UTERU2037791, highly similar to Human mRNA for alpha-actinin P
NM_001102.3 Homo sapiens actinin, alpha 1 (ACTN1), transcript variant 2, mRNA A
M95178.1 Human non-muscle alpha-actinin mRNA, complete cds P
CR620987.1 full-length cDNA clone CS0DM010YM22 of Fetal liver of Homo sapiens (human) P
CR609497.1 full-length cDNA clone CS0DM009YN21 of Fetal liver of Homo sapiens (human) P
AJ844628.2 Homo sapiens partial mRNA for alpha-actinin 1 (ACTN1 gene) P
AK022224.1 Homo sapiens cDNA FLJ12162 fis, clone MAMMA1000583
DQ496098.1 Homo sapiens actinin alpha 1 isoform b (ACTN1) mRNA, complete cds, alternatively spliced P
BC003576.1 Homo sapiens actinin, alpha 1, mRNA (cDNA clone MGC:2358 IMAGE:3547017), complete cds PA
AK225782.1 Homo sapiens mRNA for actinin, alpha 1 variant, clone: FCC132A11 A
BC127124.1 Homo sapiens actinin, alpha 1, mRNA (cDNA clone IMAGE:40009911), partial cds
BC015766.1 Homo sapiens actinin, alpha 1, mRNA (cDNA clone MGC:23191 IMAGE:4856734), complete cds PA
X15804.1 Human mRNA for alpha-actinin P
X55187.1 Human mRNA for alpha-actinin, partial cds P
EU716325.1 Homo sapiens actinin 1 smooth muscle variant (ACTN1) mRNA, complete cds, alternatively spliced
AK098203.1 Homo sapiens cDNA FLJ40884 fis, clone UTERU2000607, highly similar to Alpha-actinin-1 P
NM_001130005.1 Homo sapiens actinin, alpha 1 (ACTN1), transcript variant 3, mRNA A
NM_001130004.1 Homo sapiens actinin, alpha 1 (ACTN1), transcript variant 1, mRNA A
AK294317.1 Homo sapiens cDNA FLJ53313 complete cds, highly similar to Alpha-actinin-1
AK299362.1 Homo sapiens cDNA FLJ54718 complete cds, highly similar to Alpha-actinin-1
AK295099.1 Homo sapiens cDNA FLJ59209 complete cds, highly similar to Alpha-actinin-1
BC004984.1 Homo sapiens cDNA clone IMAGE:2958601, containing frame-shift errors PA

EST sequences (10 of 1731) [Show all sequences]

AA973595.1 Clone IMAGE:1569334 lung 3' read A
AI002062.1 Clone IMAGE:1613269 uncharacterized tissue 3' read PA
AI018491.1 Clone IMAGE:1642031 testis 3' read A
AI038818.1 Clone IMAGE:1664178 skin 3' read A
AI041634.1 Clone IMAGE:1663833 skin 3' read P
AI041757.1 Clone IMAGE:1664525 skin 3' read P
AI082078.1 Clone IMAGE:1679010 skin 3' read A
AI094021.1 Clone IMAGE:1688074 mixed 3' read A
AI123560.1 Clone IMAGE:1690149 mixed 3' read A
AI125716.1 Clone IMAGE:1737228 testis 3' read A


Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria

 
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