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UGID:721907     UniGene Hs.506748     Homo sapiens (human)   HDGF Order cDNA clone, Links
Hepatoma-derived growth factor (high-mobility group protein 1-like) (HDGF)
SELECTED PROTEIN SIMILARITIES
Comparison of sequences in UniGene with selected protein reference sequences. The alignments can suggest function of a gene.
Reference ProteinSpeciesId(%)Len(aa)
NP_001119522.1 hepatoma-derived growth factor isoform b H. sapiens 100.0 255
XP_513894.2 PREDICTED: hepatoma-derived growth factor (high-mobility group protein 1-like) isoform 9 P. troglodytes 100.0 239
NP_032257.3 hepatoma-derived growth factor M. musculus 99.6 236
NP_001088160.1 hypothetical protein LOC494984 X. laevis 75.7 258
NP_001012372.1 hypothetical protein LOC497284 D. rerio 70.7 198
NP_495707.1 Ribosomal Protein, Large subunit family member (rpl-10) C. elegans 62.3 122
NP_651954.2 Qm CG17521-PA, isoform A D. melanogaster 61.2 121
NP_564878.1 60S ribosomal protein L10 (RPL10C) A. thaliana 57.0 121
XP_001694428.1 ribosomal protein L10, component of cytosolic 80S ribosome and 60S large subunit C. reinhardtii 56.4 117
XP_331356.1 hypothetical protein N. crassa 45.8 144

GENE EXPRESSION
Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.
Expression Profile: View expression levels using UniGene's EST ProfileViewer
[Show more entries with profiles like this]
GEO profiles: Gene expression profiles in the NCBI Gene Expression Omnibus database
cDNA Sources: brain; lung; intestine; uterus; placenta; eye; uncharacterized tissue; embryonic tissue; skin; pancreas; mixed; liver; ovary; prostate; mammary gland; kidney; cervix; thyroid; blood; testis; mouth; bone; connective tissue; muscle; pharynx; lymph; heart; adrenal gland; trachea; ganglia; amniotic fluid; tonsil; parathyroid; esophagus; ascites; stomach; bladder; thymus; lymph node; salivary gland; bone marrow; vascular; spleen; adipose tissue; nerve; pituitary gland; ear
MAPPING POSITION
Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.
Chromosome: 1
Map position: 1q21-q23
UniSTS entry: Chr X SHGC-132399
UniSTS entry: Chr X SHGC-2664
UniSTS entry: Chr 1 RH17641
UniSTS entry: Chr 1 RH11678
UniSTS entry: Chr 1 SHGC-12542
UniSTS entry: Chr 1 SHGC-132090
UniSTS entry: Chr Y L18426
UniSTS entry: Chr Y D17S610
UniSTS entry: Chr Y D15S1477
SEQUENCES
Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (14)

L24521.1 Human transformation-related protein mRNA, 3' end
NM_004494.2 Homo sapiens hepatoma-derived growth factor (high-mobility group protein 1-like) (HDGF), transcript variant 1, mRNA PA
CR626656.1 full-length cDNA clone CS0DL001YE15 of B cells (Ramos cell line) Cot 25-normalized of Homo sapiens (human) P
CR614061.1 full-length cDNA clone CS0DM011YA01 of Fetal liver of Homo sapiens (human)
CR608806.1 full-length cDNA clone CS0CAP008YN11 of Thymus of Homo sapiens (human) P
CR593023.1 full-length cDNA clone CS0DI023YA24 of Placenta Cot 25-normalized of Homo sapiens (human) P
D16431.1 Homo sapiens mRNA for hepatoma-derived growth factor, complete cds P
BC018991.1 Homo sapiens hepatoma-derived growth factor (high-mobility group protein 1-like), mRNA (cDNA clone MGC:20061 IMAGE:3503321), complete cds PA
AK292325.1 Homo sapiens cDNA FLJ75113 complete cds P
AK315514.1 Homo sapiens cDNA, FLJ96580, highly similar to Homo sapiens hepatoma-derived growth factor (high-mobility group protein 1-like) (HDGF), mRNA P
NM_001126051.1 Homo sapiens hepatoma-derived growth factor (high-mobility group protein 1-like) (HDGF), transcript variant 3, mRNA PA
NM_001126050.1 Homo sapiens hepatoma-derived growth factor (high-mobility group protein 1-like) (HDGF), transcript variant 2, mRNA PA
AK096411.1 Homo sapiens cDNA FLJ39092 fis, clone NT2RP7019835, highly similar to HEPATOMA-DERIVED GROWTH FACTOR P
AL833592.1 Homo sapiens mRNA; cDNA DKFZp686J1764 (from clone DKFZp686J1764) PA

EST sequences (10 of 1168) [Show all sequences]

AA970347.1 Clone IMAGE:1576378 intestine 3' read A
AA973704.1 Clone IMAGE:1569079 lung 3' read A
AA978319.1 Clone IMAGE:1568033 lung 3' read
AI017247.1 Clone IMAGE:1636272 kidney 3' read A
AI018519.1 Clone IMAGE:1630964 mammary gland 3' read
AI033765.1 Clone IMAGE:1647662 parathyroid 3' read
AA948178.1 Clone IMAGE:1588129 uncharacterized tissue 3' read A
AI080417.1 Clone IMAGE:1662757 mixed 3' read A
R21607.1 Clone IMAGE:130154 placenta 5' read
AI095586.1 Clone IMAGE:1697168 uterus 3' read A


Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria

 
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