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UGID:2723722     UniGene Hs.654404     Homo sapiens (human)   HLA-C Order cDNA clone, Links
Major histocompatibility complex, class I, C (HLA-C)
SELECTED PROTEIN SIMILARITIES
Comparison of sequences in UniGene with selected protein reference sequences. The alignments can suggest function of a gene.
Reference ProteinSpeciesId(%)Len(aa)
XP_001713696.1 PREDICTED: hypothetical protein H. sapiens 91.2 364
NP_651557.1 CG3339 CG3339-PA, isoform A D. melanogaster 81.2 101
NP_001020379.1 hypothetical protein LOC547349 M. musculus 78.4 371

GENE EXPRESSION
Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.
Expression Profile: View expression levels using UniGene's EST ProfileViewer
[Show more entries with profiles like this]
Note: Highly represented in many libraries
GEO profiles: Gene expression profiles in the NCBI Gene Expression Omnibus database
cDNA Sources: uncharacterized tissue; intestine; brain; lung; pancreas; uterus; blood; placenta; spleen; liver; stomach; ovary; connective tissue; skin; prostate; eye; thymus; embryonic tissue; mammary gland; testis; heart; ganglia; mixed; mouth; cervix; kidney; larynx; bone; lymph node; lymph; thyroid; ascites; bone marrow; tonsil; muscle; esophagus; vascular; adrenal gland; pituitary gland; adipose tissue; pineal gland; bladder; ear; nerve; parathyroid; salivary gland; trachea; pharynx; umbilical cord
MAPPING POSITION
Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.
Chromosome: 6
Map position: 6p21.3
SEQUENCES
Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (148)

AJ537578.1 Homo sapiens partial mRNA for MHC class I antigen (HLA-C gene), HLA-Cw*16 allele P
U41420.1 Homo sapiens MHC class I antigen HLA-C mRNA (HLA-Cw-1603 allele), complete cds P
U41386.1 Homo sapiens MHC class I antigen HLA-C mRNA (HLA-Cw-1402 allele), complete cds P
D50852.1 Homo sapiens HLA-Cw*0102 mRNA for MHC class I antigen, complete cds P
D50853.1 Homo sapiens HLA-Cw*0303 mRNA for MHC class I antigen, complete cds P
D50854.1 Homo sapiens HLA-Cw*0803 mRNA for MHC class I antigen, complete cds P
D83031.1 Homo sapiens HLA-Cw*1502 mRNA for MHC class I antigen, complete cds P
AJ010748.1 Homo sapiens mRNA for HLA-C class I antigen, allele HLA-Cw*050x P
AJ010749.1 Homo sapiens mRNA for HLA-C class I antigen, allele HLA-Cw*070x P
M28160.1 Human lymphocyte antigen (HLA CW6) JTW1 mRNA, complete cds, clone JTW1 P
U57028.1 Human HLA class I antigen HLA-Cw mRNA (HLA-Cw*0501new allele), complete cds P
AK130592.1 Homo sapiens cDNA FLJ27082 fis, clone SPL03377 P
U09853.1 Homo sapiens HLA-Cw7 mRNA, complete cds P
CR626681.1 full-length cDNA clone CS0DB004YG05 of Neuroblastoma Cot 10-normalized of Homo sapiens (human) P
CR626476.1 full-length cDNA clone CS0CAP001YI19 of Thymus of Homo sapiens (human) P
CR626083.1 full-length cDNA clone CS0DI051YM12 of Placenta Cot 25-normalized of Homo sapiens (human) P
CR625377.1 full-length cDNA clone CS0DM006YD09 of Fetal liver of Homo sapiens (human) P
CR623932.1 full-length cDNA clone CS0CAP008YG02 of Thymus of Homo sapiens (human) P
CR622501.1 full-length cDNA clone CS0DE014YC20 of Placenta of Homo sapiens (human) P
CR620918.1 full-length cDNA clone CS0DE005YA05 of Placenta of Homo sapiens (human) P
CR619732.1 full-length cDNA clone CS0DM001YO14 of Fetal liver of Homo sapiens (human) P
CR619491.1 full-length cDNA clone CS0DC011YP05 of Neuroblastoma Cot 25-normalized of Homo sapiens (human) P
CR619374.1 full-length cDNA clone CS0DG004YJ01 of B cells (Ramos cell line) of Homo sapiens (human) P
CR617532.1 full-length cDNA clone CS0DE009YB01 of Placenta of Homo sapiens (human) P
CR613417.1 full-length cDNA clone CS0DI009YP15 of Placenta Cot 25-normalized of Homo sapiens (human) P
CR612894.1 full-length cDNA clone CS0DE005YN23 of Placenta of Homo sapiens (human) P
CR611808.1 full-length cDNA clone CL0BB013ZC08 of Neuroblastoma of Homo sapiens (human) P
CR611253.1 full-length cDNA clone CS0DE007YJ16 of Placenta of Homo sapiens (human) P
CR611167.1 full-length cDNA clone CS0CAP005YL08 of Thymus of Homo sapiens (human) P
CR610894.1 full-length cDNA clone CS0DN005YN22 of Adult brain of Homo sapiens (human) P
CR610282.1 full-length cDNA clone CS0DI016YC11 of Placenta Cot 25-normalized of Homo sapiens (human) P
CR610206.1 full-length cDNA clone CS0DA002YK18 of Neuroblastoma of Homo sapiens (human) P
CR608734.1 full-length cDNA clone CS0DI064YJ02 of Placenta Cot 25-normalized of Homo sapiens (human) P
CR608445.1 full-length cDNA clone CS0DI064YG20 of Placenta Cot 25-normalized of Homo sapiens (human) P
CR608133.1 full-length cDNA clone CS0DC006YJ06 of Neuroblastoma Cot 25-normalized of Homo sapiens (human) P
CR608009.1 full-length cDNA clone CS0DK010YL09 of HeLa cells Cot 25-normalized of Homo sapiens (human) P
CR607744.1 full-length cDNA clone CS0CAP007YB03 of Thymus of Homo sapiens (human) P
CR607446.1 full-length cDNA clone CS0DI068YH22 of Placenta Cot 25-normalized of Homo sapiens (human) P
CR607146.1 full-length cDNA clone CS0DI025YO20 of Placenta Cot 25-normalized of Homo sapiens (human) P
CR606838.1 full-length cDNA clone CS0DE001YN19 of Placenta of Homo sapiens (human) P
CR606802.1 full-length cDNA clone CS0DJ015YC15 of T cells (Jurkat cell line) Cot 10-normalized of Homo sapiens (human) P
CR606564.1 full-length cDNA clone CS0DI064YG08 of Placenta Cot 25-normalized of Homo sapiens (human) P
CR605658.1 full-length cDNA clone CS0DH004YL03 of T cells (Jurkat cell line) of Homo sapiens (human) P
CR604220.1 full-length cDNA clone CS0DI078YH20 of Placenta Cot 25-normalized of Homo sapiens (human) P
CR603910.1 full-length cDNA clone CS0DI041YF17 of Placenta Cot 25-normalized of Homo sapiens (human) P
CR602442.1 full-length cDNA clone CS0DE005YK09 of Placenta of Homo sapiens (human) P
CR602127.1 full-length cDNA clone CS0DE006YK22 of Placenta of Homo sapiens (human) P
CR601998.1 full-length cDNA clone CS0CAP003YD07 of Thymus of Homo sapiens (human) P
CR601147.1 full-length cDNA clone CS0DC020YJ03 of Neuroblastoma Cot 25-normalized of Homo sapiens (human) P
CR600524.1 full-length cDNA clone CS0DE001YF06 of Placenta of Homo sapiens (human) P
CR599470.1 full-length cDNA clone CS0DI044YH09 of Placenta Cot 25-normalized of Homo sapiens (human) P
CR598918.1 full-length cDNA clone CS0DE006YG20 of Placenta of Homo sapiens (human) P
CR598290.1 full-length cDNA clone CS0DI061YA18 of Placenta Cot 25-normalized of Homo sapiens (human) P
CR597526.1 full-length cDNA clone CS0CAP002YL01 of Thymus of Homo sapiens (human)
CR596955.1 full-length cDNA clone CS0DI054YG18 of Placenta Cot 25-normalized of Homo sapiens (human) P
CR595198.1 full-length cDNA clone CS0DE010YH18 of Placenta of Homo sapiens (human) P
CR593350.1 full-length cDNA clone CS0DI075YC04 of Placenta Cot 25-normalized of Homo sapiens (human) P
CR592947.1 full-length cDNA clone CS0DG002YD16 of B cells (Ramos cell line) of Homo sapiens (human) P
CR591580.1 full-length cDNA clone CS0DI066YK14 of Placenta Cot 25-normalized of Homo sapiens (human) P
CR590624.1 full-length cDNA clone CS0DF028YG18 of Fetal brain of Homo sapiens (human) P
AY732487.1 Homo sapiens MHC class I antigen (HLA-C) mRNA, complete cds P
M11886.1 Human MHC class I HLA-C allele HLA-4, partial cds P
M26712.1 Human major histocompatibility class I HLA-Cw2.2 heavy chain mRNA, partial cds P
AF168611.1 Homo sapiens HLA-C class I antigen (HLA-C) mRNA, HLA-Cw*05DZ allele, complete cds P
L38251.1 Homo sapiens major histocompatibility complex class I (HLAC) mRNA, complete cds P
M28207.1 Homo sapiens (clone pMF17) MHC class I HLA-Cw7 mRNA, 3' end, haplotype A1/A2,B8/Bw62,Cw3/Cw7 P
AK024836.1 Homo sapiens cDNA: FLJ21183 fis, clone CAS11634, highly similar to HSHLACW07 Homo sapiens mRNA for human leukocyte antigen C alpha chain PA
M24096.1 Human MHC class I HLA-C-alpha-2 chain mRNA, partial cds, clone 9 P
M24097.1 Human MHC class I HLA-C-alpha-2 chain and alternative mRNA, complete cds, clones 4 and 10 P
M84171.1 Human MHC class I (HLA-Cw1.2) mRNA exons 1-7, complete cds P
M84172.1 Human MHC class I (HLA-Cw3.2) mRNA exons 1-7, complete cds P
M84173.1 Human MHC class I (HLA-Cw8.2) mRNA exons 1-7, complete cds P
M84174.1 Human MHC class I (HLA-Cw8.1) mRNA exons 1-7, complete cds P
M12679.1 Human Cw1 antigen mRNA, complete cds P
M26429.1 Human MHC class I HLA-Cw1 gene, complete cds P
M26430.1 Human MHC class I HLA-Cw2 gene, complete cds P
M26431.1 Human MHC class I HLA-Cw3 gene, complete cds P
M99388.1 Homo sapiens HLA class I heavy chain (HLA-Cw-1503) mRNA, complete cds P
M99389.1 Human MHC class I HLA heavy chain (HLA-Cw-0304) mRNA, complete cds P
M99390.1 Human MHC class I HLA heavy chain (HLA-Cw-0303) mRNA, complete cds P
M21963.1 Human (clone pC68) MHC class I HLA-Cx52 mRNA, 3' end cds PA
AM237285.2 Homo sapiens partial mRNA for MHC class I antigen (HLA-C gene), HLA-Cw*07x05 hybrid allele
NM_002117.4 Homo sapiens major histocompatibility complex, class I, C (HLA-C), mRNA PA
BC002463.1 Homo sapiens major histocompatibility complex, class I, C, mRNA (cDNA clone MGC:2285 IMAGE:3345005), complete cds PA
BC004489.2 Homo sapiens major histocompatibility complex, class I, C, mRNA (cDNA clone IMAGE:3678099), partial cds PA
BC007814.2 Homo sapiens major histocompatibility complex, class I, C, mRNA (cDNA clone IMAGE:4299697), partial cds PA
BC008457.1 Homo sapiens major histocompatibility complex, class I, C, mRNA (cDNA clone MGC:14707 IMAGE:4249847), complete cds PA
X83394.1 H.sapiens mRNA for HLA-Cw*0704 P
BC010542.1 Homo sapiens, clone IMAGE:3459298, mRNA, partial cds PA
AF405691.1 Homo sapiens MHC class I antigen heavy chain (HLA-CW) mRNA, HLA-CW*04null allele, complete cds P
D12471.1 Homo sapiens HLA-C (Cw*1201) mRNA for HLA-Cw12, complete cds
M24031.1 Human MHC class I HLA-Cw11 chain mRNA (A2.4a; B27; Cw11), 3' end P
AF196489.1 Homo sapiens MHC class I antigen (HLA-C) mRNA, HLA-C-Cw*0409 N allele, complete cds P
AK301283.1 Homo sapiens cDNA FLJ54183 complete cds, highly similar to HLA class I histocompatibility antigen, Cw-7 alpha chain precursor
AK304527.1 Homo sapiens cDNA FLJ53134 complete cds, highly similar to HLA class I histocompatibility antigen, Cw-7alpha chain precursor A
AJ440716.2 Homo sapiens partial mRNA for MHC class I antigen (HLA-C gene, HLA-Cw*07 allele), exons 2 and 3 P
X67818.1 H.sapiens mRNA for HLA-Cw*1502 P
D49820.1 Homo sapiens Cw*1402 mRNA for MHC class I antigen, partial cds P
X76189.1 H. sapiens HLA-Cw*1602 mRNA P
X70856.1 H.sapiens mRNA for HLA-Cw*12022 P
X70857.1 H.sapiens mRNA for HLA-Cw*0602 P
X73518.1 H.sapiens mRNA for HLA-C alpha chain (Cw*1504) P
AJ005199.1 Homo sapiens HLA-Cw*03MAC gene, exons 2 and 3 P
X82122.1 H.sapiens mRNA for HLA-Cw*1203 P
Z83803.1 H.sapiens mRNA for axonemal dynein heavy chain (partial, ID hdhc4) P
X58536.1 Human mRNA for HLA class I locus C heavy chain P
D83741.1 Homo sapiens HLA-Cw*12022 mRNA for MHC class I antigen, partial cds P
D83030.1 Homo sapiens HLA-Cw*04011 mRNA for MHC class I antigen, partial cds P
X78343.1 H.sapiens mRNA for HLA-Cw*1505 P
D83029.1 Homo sapiens mRNA for HLA-Cw*2, partial cds P
D64147.1 Homo sapiens mRNA for HLA-Cw*0602, partial cds P
D64148.1 Homo sapiens mRNA for HLA-Cw5, partial cds P
D64149.1 Homo sapiens mRNA for HLA-Cw*1702, partial cds P
D64152.1 Homo sapiens mRNA for HLA-Cw*12022, partial cds P
D64151.1 Homo sapiens mRNA for HLA-Cw*0801, partial cds P
D64150.1 Homo sapiens mRNA for HLA-Cw*0304, partial cds P
D64146.1 Homo sapiens mRNA for HLA-Cw*1203, partial cds P
Z33459.1 H.sapiens mRNA for MHC class I HLA-C allele P
X99704.1 H.sapiens mRNA for HLA-Cw*1204 P
Z15144.1 H.sapiens mRNA for MHC class I HLA-Cw*0803 (partial) P
Z47377.1 H.sapiens HLA-Cw gene (exon 2-4) P
Z46810.1 H.sapiens HLA-Cw*0701 mRNA for HLA-Cw7 P
Z46809.1 H.sapiens HLA-Cw*0102 mRNA for HLA-Cw1 P
M84386.1 Human MHC class I lymphocyte antigen (HLA-Cw*0401) mRNA, 5' end P
M64256.1 Human MHC class I HLA-B mRNA, partial cds
M28206.1 Homo sapiens (clone pMS1) MHC class I HLA-Cw6 mRNA, 3' end, haplotype A2/A30,B13,Cw6 P
U06835.1 Human clone RSH 34 MHC class I HLA-Cw mRNA, partial cds P
U07230.1 Human MHC class I HLA-Cw mRNA, partial cds P
L20091.1 Human MHC class I (HLA-C w1502) mRNA fragment P
D64145.1 Homo sapiens mRNA for HLA-Cw*0103, complete cds P
BC033293.1 Homo sapiens major histocompatibility complex, class I, C, mRNA (cDNA clone MGC:24960 IMAGE:4780246), complete cds PA
U06487.1 Human clone LUY 2/12 MHC class I histocompatibility antigen (HLA-Cw) mRNA, complete cds P
U06695.1 Human clone WDV 14/16 MHC class I histocompatibility antigen (HLA-Cw) mRNA, complete cds P
U06696.1 Human clone DO208915 6/7 MHC class I histocompatibility antigen (HLA-Cw) mRNA, complete cds P
BC041078.1 Homo sapiens major histocompatibility complex, class I, C, mRNA (cDNA clone IMAGE:5926397), containing frame-shift errors PA
X87841.1 H.sapiens mRNA for HLA-C alpha chain (allele Cw*15052) P
X96582.1 H.sapiens mRNA for HLA-C alpha chain P
X97321.1 H.sapiens mRNA for human leukocyte antigen C alpha chain P
Y10520.1 H.sapiens mRNA for HLA-C alpha chain (Cw*1701) P
Z83247.1 H.sapiens mRNA for human leukocyte antigen-C (allele Cw*1205) P
X98742.1 H.sapiens mRNA for HLA-C alpha chain (Cw*17) P
D38526.1 Homo sapiens mRNA for HLA-Cw*0702, complete cds P
D49552.1 Homo sapiens mRNA for HLA-Cw*0704, complete cds P
D49819.1 Homo sapiens mRNA for HLA-Cw*0702, complete cds P
D31817.1 Homo sapiens HLA-Cw*1403 mRNA, complete cds P
Y09156.1 H.sapiens mRNA for HLA-C antigen alpha chain (Cw*18GB) P
U62824.1 Homo sapiens HLA class I heavy chain (HLA-Cw*1701) mRNA, complete cds P
Y11843.1 H.sapiens mRNA for MHC class I human leukocyte antigen, allele HLA-Cw*12042 P

EST sequences (10 of 3339) [Show all sequences]

AA954857.1 Clone IMAGE:1576205 intestine 3' read A
AA922348.1 Clone IMAGE:1486296 mouth 3' read
AA927269.1 Clone IMAGE:1486658 mouth 3' read A
AA989127.1 Clone IMAGE:1601727 lung 3' read A
AA992331.1 Clone IMAGE:1613522 uncharacterized tissue 3' read A
AA992345.1 Clone IMAGE:1613618 uncharacterized tissue 3' read A
AA996041.1 Clone IMAGE:1606863 kidney 3' read A
AA834088.1 Clone IMAGE:1422244 kidney
AA902742.1 Clone IMAGE:1519087 uncharacterized tissue 3' read A
AI003824.1 Clone IMAGE:1619560 testis 3' read A


Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria

 
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