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UGID:2394421     UniGene Hs.645344     Homo sapiens (human)   LOC728658 Links
Similar to 23 kD highly basic protein (LOC728658)
SELECTED PROTEIN SIMILARITIES
Comparison of sequences in UniGene with selected protein reference sequences. The alignments can suggest function of a gene.
Reference ProteinSpeciesId(%)Len(aa)
XP_001115079.1 PREDICTED: similar to ribosomal protein L13a M. mulatta 100.0 202
XP_001154104.1 PREDICTED: similar to 23 kD highly basic protein isoform 3 P. troglodytes 100.0 202
NP_036555.1 ribosomal protein L13a H. sapiens 100.0 202
XP_001491926.1 PREDICTED: similar to ribosomal protein L13a E. caballus 100.0 202
NP_033464.2 ribosomal protein L13a M. musculus 99.5 202
NP_775462.2 ribosomal protein L13A R. norvegicus 99.5 202
NP_001070466.1 ribosomal protein L13a B. taurus 99.5 202
NP_001080130.1 ribosomal protein L13a X. laevis 97.2 212
NP_997949.1 ribosomal protein L13a D. rerio 95.6 204
XP_001692909.1 ribosomal protein L13a, component of cytosolic 80S ribosome and 60S large subunit C. reinhardtii 74.5 184
NP_193053.1 60S ribosomal protein L13A (RPL13aC) A. thaliana 73.5 204
NP_649560.1 Ribosomal protein L13A CG1475-PB D. melanogaster 71.4 202
XP_326714.1 probable ribosomal protein l13a [MIPS] N. crassa 71.0 199
NP_012133.1 N-terminally acetylated protein component of the large (60S) ribosomal subunit, binds to 5.8 S rRNA; has similarity to Rpl16Bp, E. coli L13 and rat L13a ribosomal proteins; transcriptionally regulated by Rap1p; Rpl16ap S. cerevisiae 69.2 198
NP_497721.1 Ribosomal Protein, Large subunit family member (rpl-16) C. elegans 66.7 201

GENE EXPRESSION
Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.
Expression Profile: View expression levels using UniGene's EST ProfileViewer
[Show more entries with profiles like this]
Note: Highly represented (1.2 pct) in cDNA library dbEST:684, Fetal brain III.
Note: Highly represented (1.1 pct) in cDNA library dbEST:1015, NCI_CGAP_Lym3.
Note: Highly represented (1.1 pct) in cDNA library dbEST:797, Fetal skin.
GEO profiles: Gene expression profiles in the NCBI Gene Expression Omnibus database
cDNA Sources: pancreas; lung; brain; prostate; intestine; skin; liver; eye; mixed; uterus; lymph; uncharacterized tissue; ovary; kidney; bone; placenta; muscle; connective tissue; cervix; embryonic tissue; blood; lymph node; tonsil; testis; mammary gland; bone marrow; vascular; umbilical cord; stomach; parathyroid; bladder; adrenal gland; heart; esophagus; salivary gland; ear; spleen; pharynx; thyroid; pituitary gland; pineal gland; adipose tissue; ascites; nerve; thymus; epididymis; larynx
MAPPING POSITION
Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.
Chromosome: 10
Map position: 10q24.1
UniSTS entry: Chr 21 RH27395
UniSTS entry: Chr 21 D19S1021
UniSTS entry: Chr 21 RH38886
SEQUENCES
Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (1)

U58669.1 Human mRNA upregulated during camptothecin-induced apoptosis of U937 cells

Model sequences (1)

XM_001128053.2 PREDICTED: Homo sapiens similar to 23 kD highly basic protein (LOC728658), mRNA P

EST sequences (10 of 1937) [Show all sequences]

AA954875.1 Clone IMAGE:1576235 intestine 3' read P
AA836788.1 Clone IMAGE:1422620 kidney PA
AA862786.1 Clone IMAGE:1469175 uncharacterized tissue 3' read P
AA865427.1 Clone IMAGE:1459232 kidney 3' read PA
AA961414.1 Clone IMAGE:1597871 uncharacterized tissue 3' read PA
AA961578.1 Clone IMAGE:1592644 kidney 3' read P
AA961782.1 Clone IMAGE:1598381 uncharacterized tissue 3' read PA
AA968568.1 Clone IMAGE:1592202 kidney 3' read PA
AA970804.1 Clone IMAGE:1576491 intestine 3' read P
AA971177.1 Clone IMAGE:1575407 kidney 3' read P


Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria

 
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