Similar to Os05g0242100, Homo sapiens

Expression Profile:

View expression levels using UniGene's EST ProfileViewer
[Show more entries with profiles like this]

Highly represented in several libraries

GEO profiles:

Gene expression profiles in the NCBI Gene Expression Omnibus database

cDNA Sources:

brain; blood; pancreas; lung; mixed; skin; embryonic tissue; muscle; liver; eye; prostate; uncharacterized tissue; ascites; ovary; pharynx; intestine; testis; placenta; stomach; heart; thyroid; mammary gland; uterus; lymph; ear; salivary gland; kidney; bone; bone marrow; pituitary gland; nerve; adrenal gland; esophagus; bladder; cervix; vascular; lymph node; mouth; thymus; spleen; spinal cord; larynx; adipose tissue; amniotic fluid; umbilical cord; trachea; tonsil; epididymis; pineal gland; peritoneum; connective tissue

NCBI

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Finding cDNAs

UGID:195368 UniGene Hs.356190 Homo sapiens (human) UBB

Order cDNA clone, Links

Similar to Os05g0242100 (UBB)

SELECTED PROTEIN SIMILARITIES

Comparison of sequences in UniGene with selected protein reference sequences. The alignments can suggest function of a gene.

Reference Protein		Species	Id(%)	Len(aa)
XP_001509120.1	PREDICTED: similar to ubiquitin C	O. anatinus	100.0	380
XP_001073679.1	PREDICTED: similar to ubiquitin C isoform 1	R. norvegicus	100.0	232
XP_001087796.1	PREDICTED: similar to ubiquitin B precursor isoform 1	M. mulatta	100.0	228
NP_001098779.1	ubiquitin B	S. scrofa	100.0	228
XP_001479882.1	PREDICTED: similar to Ubc protein isoform 1	M. musculus	98.8	536
NP_567247.2	UBQ14 (ubiquitin 14); protein binding	A. thaliana	97.4	228
NP_995994.1	Ubiquitin-63E CG11624-PC, isoform C	D. melanogaster	96.9	762
XP_958803.1	polyubiquitin	N. crassa	96.7	304
NP_003324.1	ubiquitin and ribosomal protein L40 precursor	H. sapiens	96.2	106
NP_741158.2	UBiQuitin family member (ubq-1)	C. elegans	91.4	482
NP_001086065.1	MGC81889 protein	X. laevis	89.8	137

GENE EXPRESSION

Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.

MAPPING POSITION

Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.

	Chromosome:	17
	Map position:	17p12-p11.2

SEQUENCES

Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (7)

AK129498.1	Homo sapiens cDNA FLJ25987 fis, clone CBR05488, highly similar to Homo sapiens ubiquitin B (UBB)	P
CR620731.1	full-length cDNA clone CS0DF038YI22 of Fetal brain of Homo sapiens (human)	P
CR607481.1	full-length cDNA clone CS0DN001YF11 of Adult brain of Homo sapiens (human)	P
CR590697.1	full-length cDNA clone CS0DE002YC17 of Placenta of Homo sapiens (human)	P
CR589965.1	full-length cDNA clone CS0DF011YA08 of Fetal brain of Homo sapiens (human)	P
BT020104.1	Homo sapiens ubiquitin B mRNA, complete cds	P
NM_018955.2	Homo sapiens ubiquitin B (UBB), mRNA	P

Model sequences (2)

	XM_001722328.1	PREDICTED: Homo sapiens similar to Os05g0242100, transcript variant 1 (LOC100133337), mRNA	A
	XM_001722331.1	PREDICTED: Homo sapiens similar to Os05g0242100, transcript variant 2 (LOC100133337), mRNA	A

EST sequences (10 of 1810) [Show all sequences]

AA962202.1	Clone IMAGE:1553496	kidney	3' read	P
AA999761.1	Clone IMAGE:1612944	uncharacterized tissue	3' read	P
AI002891.1	Clone IMAGE:1683852	brain	3' read	P
CB044489.1	Clone IMAGE:3217751	intestine	5' read	P
CB067770.1	Clone IMAGE:	pancreas	5' read	P
CB069489.1	Clone IMAGE:6364996	pancreas	5' read	P
BX091354.1	Clone IMAGp998B03315_;_IMAGE:173474	brain		P
CB144077.1	Clone L16HLK3-3-C05	liver	5' read	P
CB145997.1	Clone L16HLK3-13-A02	liver	5' read	P
CB146017.1	Clone L16HLK3-13-C06	liver	5' read	P

Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria