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UGID:273535     UniGene Mm.61526     Mus musculus (mouse)   Hmgcs1 Order cDNA clone, Links
3-hydroxy-3-methylglutaryl-Coenzyme A synthase 1 (Hmgcs1)
SELECTED PROTEIN SIMILARITIES
Comparison of sequences in UniGene with selected protein reference sequences. The alignments can suggest function of a gene.
Reference ProteinSpeciesId(%)Len(aa)
XP_001475239.1 PREDICTED: similar to Hmgcs1 protein isoform 1 M. musculus 100.0 519
NP_725568.1 HMG Coenzyme A synthase CG4311-PC, isoform C D. melanogaster 74.9 462
XP_957561.1 hydroxymethylglutaryl-CoA synthase N. crassa 63.0 448

GENE EXPRESSION
Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.
Expression Profile: View expression levels using UniGene's EST ProfileViewer
[Show more entries with profiles like this]
GEO profiles: Gene expression profiles in the NCBI Gene Expression Omnibus database
cDNA Sources: embryonic tissue; brain; uncharacterized tissue; eye; kidney; mixed; skin; fertilized ovum; liver; mammary gland; testis; extraembryonic tissue; bone; lymph node; thymus; ovary; sympathetic ganglion; pancreas; joint; muscle; bladder; vagina; spinal cord; dorsal root ganglion; bone marrow; intestine; lung; nasopharynx; inner ear; spleen; connective tissue; heart; adrenal gland; pituitary gland
MAPPING POSITION
Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.
Chromosome: 13|63642042
SEQUENCES
Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (21)

AK078743.1 Mus musculus 15 days embryo male testis cDNA, RIKEN full-length enriched library, clone:8030402P03 product:similar to hydroxymethylglutaryl-CoA synthase (EC 4.1.3.5) (fragment) [Gallus gallus], full insert sequence P
AK045094.1 Mus musculus 9.5 days embryo parthenogenote cDNA, RIKEN full-length enriched library, clone:B130032C06 product:pre B-cell leukemia transcription factor 1, full insert sequence P
AK044835.1 Mus musculus 9.5 days embryo parthenogenote cDNA, RIKEN full-length enriched library, clone:B130007E24 product:pre B-cell leukemia transcription factor 1, full insert sequence P
AK031297.1 Mus musculus 13 days embryo male testis cDNA, RIKEN full-length enriched library, clone:6030403N11 product:pre B-cell leukemia transcription factor 1, full insert sequence P
BC013443.1 Mus musculus 3-hydroxy-3-methylglutaryl-Coenzyme A synthase 1, mRNA (cDNA clone IMAGE:4235423), with apparent retained intron PA
AK201868.1 Mus musculus cDNA, clone:Y1G0139J24, strand:plus, reference:ENSEMBL:Mouse-Transcript-ENST:ENSMUST00000064661, based on BLAT search P
AK201446.1 Mus musculus cDNA, clone:Y1G0138E18, strand:unspecified
AK199059.1 Mus musculus cDNA, clone:Y1G0130A10, strand:unspecified
AK191228.1 Mus musculus cDNA, clone:Y1G0105D22, strand:minus, reference:ENSEMBL:Mouse-Transcript-ENST:ENSMUST00000064661, based on BLAT search P
AK146351.1 Mus musculus CRL-1722 L5178Y-R cDNA, RIKEN full-length enriched library, clone:I730059K24 product:3-hydroxy-3-methylglutaryl-Coenzyme A synthase 1, full insert sequence P
AK146042.1 Mus musculus 14 days embryo liver cDNA, RIKEN full-length enriched library, clone:I530025N24 product:3-hydroxy-3-methylglutaryl-Coenzyme A synthase 1, full insert sequence P
AK145424.1 Mus musculus morula whole body morula cDNA, RIKEN full-length enriched library, clone:I0C0042J20 product:3-hydroxy-3-methylglutaryl-Coenzyme A synthase 1, full insert sequence P
AK136171.1 Mus musculus in vitro fertilized eggs cDNA, RIKEN full-length enriched library, clone:7420468O09 product:3-hydroxy-3-methylglutaryl-Coenzyme A synthase 1, full insert sequence P
AK144384.1 Mus musculus 16 days neonate male medulla oblongata cDNA, RIKEN full-length enriched library, clone:G630049A12 product:3-hydroxy-3-methylglutaryl-Coenzyme A synthase 1, full insert sequence P
AK135551.1 Mus musculus 12 days embryo female mullerian duct includes surrounding region cDNA, RIKEN full-length enriched library, clone:6820447N24 product:3-hydroxy-3-methylglutaryl-Coenzyme A synthase 1, full insert sequence P
AK146590.1 Mus musculus 13 days embryo liver cDNA, RIKEN full-length enriched library, clone:I920030F14 product:3-hydroxy-3-methylglutaryl-Coenzyme A synthase 1, full insert sequence P
BC029693.1 Mus musculus 3-hydroxy-3-methylglutaryl-Coenzyme A synthase 1, mRNA (cDNA clone MGC:36525 IMAGE:5375374), complete cds PA
BC031363.1 Mus musculus 3-hydroxy-3-methylglutaryl-Coenzyme A synthase 1, mRNA (cDNA clone MGC:36633 IMAGE:5357048), complete cds PA
BC034317.1 Mus musculus 3-hydroxy-3-methylglutaryl-Coenzyme A synthase 1, mRNA (cDNA clone MGC:36662 IMAGE:5366786), complete cds PA
NM_145942.4 Mus musculus 3-hydroxy-3-methylglutaryl-Coenzyme A synthase 1 (Hmgcs1), mRNA
BC023851.1 Mus musculus 3-hydroxy-3-methylglutaryl-Coenzyme A synthase 1, mRNA (cDNA clone MGC:36620 IMAGE:5347038), complete cds PA

EST sequences (10 of 784) [Show all sequences]

CA563799.1 Clone NIA:K0318B06_IMAGE:30055985 bone 5' read PM
CA564014.1 Clone NIA:K0320H03_IMAGE:30056246 bone 5' read P
CA564054.1 Clone NIA:K0321D03_IMAGE:30056294 bone 5' read P
CA564896.1 Clone NIA:K0331E01_IMAGE:30057264 bone 5' read P
CA565301.1 Clone NIA:K0336D07_IMAGE:30057738 bone 5' read P
CA566113.1 Clone NIA:K0346D05_IMAGE:30058696 bone 5' read P
CA748263.1 brain
CA750760.1 Clone IMAGE:6829397 brain 5' read PM
BY003974.1 Clone E530119A11 brain 5' read
BY010208.1 Clone G730017O21 lung 5' read


Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria

 
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