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LABORATORY OF MOLECULAR GROWTH REGULATION

 

Bruce H. Howard, MD, Chief

The Laboratory of Molecular Growth Regulation (LMGR) conducts research on the control of cell proliferation, DNA replication, and gene regulation. With respect to the latter, independent groups work in complementary areas, including regulation of the developing immune system, gene expression during early embryogenesis, chromatin-mediated gene silencing, and transcription of small RNA-encoding genes.

Keiko Ozato’s group, the Section on Molecular Genetics of Immunity, studies transcription factors that control cell proliferation and differentiation in the immune system. Studies on IRF-8 have revealed its importance for the proper development of macrophages, granulocytes, and dendritic cells. Defects in these cell lineages have severe consequences for innate immunity. Both IRF-8 and Brd4, another transcription factor under investigation, were shown to function by regulating the activity of chromatin. IRF-8 recruits the chromatin remodeling protein BRG1. Brd4 recognizes acetylated histones in live cells and remains bound to chromosomes during mitosis.

Investigations carried out by the Section on Eukaryotic Gene Regulation, led by Mel DePamphilis, concern control of gene expression during early mouse embryogenesis, which has been linked to the transcription factor mTEAD-2. Experiments have identified YAP65 as a long sought-after co-activator of the TEAD family of transcription factors. Current experiments focus on the identification of target genes for the TEAD-YAP65 complex. An independent project led by investigators working on mTEAD-2 concerns cell cycle control and the role of the ORC complex in DNA replication. ORC1, which is ubiquitinated and released from chromatin during S phase, is a key component in the ORC cycle as well as a link between DNA replication and cell metabolism.

Still another area of study relates to the multifunctional factor known as human La antigen. Work in the Section on Molecular and Cell Biology, under the direction of Richard Maraia, has indicated that La antigen is essential for development. The protein is a regulatory chaperone for nascent RNAs and is required for proper nuclear trafficking and the successful processing of tRNAs. Phosphorylation of La modulates its interaction with nascent transcripts as well as its localization to the nucleolus.

A major effort of the Human Genetics Section, led by Bruce Howard, focuses on higher-order chromatin structure, in particular how defects in the maintenance of such structures may underlie developmental disorders and age-related diseases. Random genome sampling, customized search algorithms for genome comparisons, and genomics-style high-throughput approaches facilitate the detection and mapping of age-related areas of chromatin remodeling.

A research group led by David Clark, the Unit on Chromatin and Gene Expression, brings to the LMGR expertise in both yeast genetics and the characterization of purified chromatin structures. Studies with the latter have revealed unexpected and intriguing properties of chromatin-remodeling machines.