3-ketodihydrosphingosine reductase, Homo sapiens

Expression Profile:

View expression levels using UniGene's EST ProfileViewer
[Show more entries with profiles like this]

Highly represented (2.8 pct) in cDNA library dbEST:3634, ST0234.

Highly represented (1.2 pct) in cDNA library dbEST:3882, ST0278.

Highly represented (1.1 pct) in cDNA library dbEST:5005, BT0642.

GEO profiles:

Gene expression profiles in the NCBI Gene Expression Omnibus database

cDNA Sources:

brain; uncharacterized tissue; connective tissue; intestine; testis; pharynx; mixed; placenta; stomach; liver; uterus; mammary gland; blood; thyroid; kidney; skin; bone; heart; bone marrow; esophagus; prostate; salivary gland; vascular; adrenal gland; ovary; thymus; bladder; trachea; eye; lung; embryonic tissue; pancreas; lymph node; cervix; muscle; parathyroid; larynx; ascites; spleen; ganglia; mouth; adipose tissue

NCBI

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Finding cDNAs

UGID:139635 UniGene Hs.74050 Homo sapiens (human) KDSR

Links

3-ketodihydrosphingosine reductase (KDSR)

SELECTED PROTEIN SIMILARITIES

Comparison of sequences in UniGene with selected protein reference sequences. The alignments can suggest function of a gene.

Reference Protein		Species	Id(%)	Len(aa)
XP_001146230.1	PREDICTED: similar to FVT1 isoform 3	P. troglodytes	100.0	331

GENE EXPRESSION

Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.

MAPPING POSITION

Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.

	Chromosome:	18
	Map position:	18q21.3

SEQUENCES

Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (9)

BT006782.1	Homo sapiens follicular lymphoma variant translocation 1 mRNA, complete cds	P
NM_002035.2	Homo sapiens 3-ketodihydrosphingosine reductase (KDSR), mRNA
CR594682.1	full-length cDNA clone CS0DM009YB12 of Fetal liver of Homo sapiens (human)	P
AK025120.1	Homo sapiens cDNA: FLJ21467 fis, clone COL04847, highly similar to HSFVT1A Homo sapiens fvt1 mRNA	A
AK312360.1	Homo sapiens cDNA, FLJ92680, Homo sapiens follicular lymphoma variant translocation 1 (FVT1),mRNA
AK093874.1	Homo sapiens cDNA FLJ36555 fis, clone TRACH2008716
AK297670.1	Homo sapiens cDNA FLJ57536 complete cds, moderately similar to 3-ketodihydrosphingosine reductase precursor (EC 1.1.1.102)
X63657.1	Homo sapiens fvt1 mRNA	P
AF086045.1	Homo sapiens full length insert cDNA clone YX81F03	A

EST sequences (10 of 502) [Show all sequences]

R08845.1	Clone IMAGE:127471	mixed	3' read	A
AA923562.1	Clone IMAGE:1536219	kidney	3' read	A
AI090280.1	Clone IMAGE:1697613	uterus	3' read	A
R24579.1	Clone IMAGE:34415	brain	5' read	P
BX116655.1	Clone IMAGp998B06472_;_IMAGE:233765	mixed
BX118052.1	Clone IMAGp998C21252_;_IMAGE:158156	mammary gland		A
CB120355.1	Clone L7N800102-8-D07	liver	5' read	P
CB144336.1	Clone B2N807043-2-G09	brain	5' read	P
CB116793.1	Clone L10ChoCK0-6-G10	liver	5' read	P
AI199519.1	Clone IMAGE:1860547	brain	3' read	A

Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria