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Finding cDNAs
UGID:1292999     UniGene Hs.533624     Homo sapiens (human)   H3F3A Links
Similar to histone (H3F3A)
SELECTED PROTEIN SIMILARITIES
Comparison of sequences in UniGene with selected protein reference sequences. The alignments can suggest function of a gene.
Reference ProteinSpeciesId(%)Len(aa)
XP_001716494.1 PREDICTED: similar to histone H. sapiens 100.0 180
XP_001474439.1 PREDICTED: hypothetical protein M. musculus 100.0 135
NP_446437.1 H3 histone, family 3B R. norvegicus 100.0 135
XP_001368225.1 PREDICTED: hypothetical protein M. domestica 100.0 135
XP_001623766.1 predicted protein N. vectensis 100.0 135
NP_509344.1 HIStone family member (his-71) C. elegans 100.0 135
XP_001949594.1 PREDICTED: similar to Histone H3.3B CG8989-PA A. pisum 100.0 135
XP_975889.1 PREDICTED: similar to Histone H3.3B CG8989-PA isoform 2 T. castaneum 100.0 135
NP_001091756.1 h3 histone family 3a B. mori 100.0 135
XP_001657554.1 histone H3.3 A. aegypti 100.0 135
XP_321242.1 AGAP001813-PA A. gambiae 100.0 135
XP_001867328.1 histone H3.3 type 2 C. quinquefasciatus 100.0 135
NP_511095.1 Histone H3.3B CG8989-PA, isoform A D. melanogaster 100.0 135
XP_001120696.1 PREDICTED: similar to H3 histone, family 3B A. mellifera 100.0 135
XP_001178736.1 PREDICTED: similar to H3.3 histone S. purpuratus 100.0 135
XP_002119783.1 PREDICTED: similar to Histone H3.3B CG8989-PA C. intestinalis 100.0 135
NP_956297.1 H3 histone, family 3C D. rerio 100.0 135
NP_001080065.1 H3 histone, family 3B (H3.3B) X. laevis 100.0 135
NP_989026.1 H3 histone, family 3B (H3.3B) X. tropicalis 100.0 135
NP_990627.1 H3 histone, family 3B (H3.3B) G. gallus 100.0 135
XP_001514538.1 PREDICTED: hypothetical protein O. anatinus 100.0 135
XP_001091581.1 PREDICTED: similar to H3 histone, family 3B isoform 1 M. mulatta 100.0 135
XP_001140055.1 PREDICTED: hypothetical protein isoform 5 P. troglodytes 100.0 135
XP_537232.1 PREDICTED: similar to H3 histone, family 3B isoform 1 C. lupus familiaris 100.0 135
XP_001495110.1 PREDICTED: similar to Histone H3.3B CG8989-PA isoform 1 E. caballus 100.0 135
NP_999095.1 histone H3.3A S. scrofa 100.0 135
NP_001014411.1 H3 histone, family 3A B. taurus 100.0 135
NP_001078517.1 histone H3.2 A. thaliana 97.1 135
XP_328074.1 HISTONE H3 N. crassa 96.3 135
NP_009564.1 One of two identical histone H3 proteins (see also HHT2); core histone required for chromatin assembly, involved in heterochromatin-mediated telomeric and HM silencing; regulated by acetylation, methylation, and mitotic phosphorylation; Hht1p S. cerevisiae 95.6 135
XP_001690671.1 histone H3 C. reinhardtii 95.6 134

GENE EXPRESSION
Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.
Expression Profile: View expression levels using UniGene's EST ProfileViewer
[Show more entries with profiles like this]
Note: Highly represented in several libraries
GEO profiles: Gene expression profiles in the NCBI Gene Expression Omnibus database
cDNA Sources: brain; uterus; stomach; pancreas; embryonic tissue; liver; lung; mixed; intestine; eye; testis; uncharacterized tissue; blood; placenta; prostate; muscle; ascites; larynx; epididymis; mammary gland; ovary; skin; tonsil; bone marrow; bone; spinal cord; kidney; lymph node; heart; thyroid; pituitary gland; thymus; vascular; mouth; cervix; lymph; umbilical cord; bladder; pharynx; pineal gland; esophagus; ear; spleen; parathyroid; nerve; adrenal gland; adipose tissue; salivary gland
MAPPING POSITION
Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.
Chromosome: 2
Map position: 1q41
UniSTS entry: Chr X WI-6046
UniSTS entry: Chr 4 D15S1185
SEQUENCES
Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (10)

CR620119.1 full-length cDNA clone CS0DI012YE18 of Placenta Cot 25-normalized of Homo sapiens (human) P
CR618614.1 full-length cDNA clone CS0DL002YP15 of B cells (Ramos cell line) Cot 25-normalized of Homo sapiens (human) P
CR613651.1 full-length cDNA clone CS0DJ011YI23 of T cells (Jurkat cell line) Cot 10-normalized of Homo sapiens (human) P
CR611775.1 full-length cDNA clone CS0DI039YF23 of Placenta Cot 25-normalized of Homo sapiens (human) P
CR604105.1 full-length cDNA clone CS0DC005YN21 of Neuroblastoma Cot 25-normalized of Homo sapiens (human) P
CR595231.1 full-length cDNA clone CS0DM009YD06 of Fetal liver of Homo sapiens (human) P
CR594691.1 full-length cDNA clone CS0DB001YJ10 of Neuroblastoma Cot 10-normalized of Homo sapiens (human) P
M11354.1 Human H3.3 histone, class B mRNA, complete cds P
AK291102.1 Homo sapiens cDNA FLJ78487 complete cds, highly similar to Homo sapiens H3 histone, family 3A (H3F3A), mRNA P
AK311905.1 Homo sapiens cDNA, FLJ92171, Homo sapiens H3 histone, family 3A (H3F3A), mRNA P

Model sequences (1)

XM_001716442.1 PREDICTED: Homo sapiens similar to histone (LOC100133109), mRNA P

EST sequences (10 of 1338) [Show all sequences]

AA954892.1 Clone IMAGE:1576263 intestine 3' read P
AA961103.1 Clone IMAGE:1569812 lung 3' read P
AA968765.1 Clone IMAGE:1597444 uncharacterized tissue 3' read
AA971862.1 Clone IMAGE:1584786 lung 3' read P
AA973697.1 Clone IMAGE:1569088 lung 3' read P
AA974043.1 Clone IMAGE:1585490 lung 3' read P
AA989136.1 Clone IMAGE:1593492 kidney 3' read P
AA988848.1 Clone IMAGE:1602061 lung 3' read P
AA999691.1 Clone IMAGE:1612906 uncharacterized tissue 3' read P
AA907407.1 Clone IMAGE:1521762 lung 3' read P


Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria

 
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