Atrophin 1, Homo sapiens - UniGene Hs.143766

Expression Profile:

View expression levels using UniGene's EST ProfileViewer
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Highly represented (1.4 pct) in cDNA library dbEST:7991, ET0178.

Highly represented (1.0 pct) in cDNA library dbEST:7818, HN0035.

GEO profiles:

Gene expression profiles in the NCBI Gene Expression Omnibus database

cDNA Sources:

brain; embryonic tissue; eye; intestine; lung; uncharacterized tissue; mixed; skin; placenta; larynx; muscle; pharynx; liver; blood; adrenal gland; epididymis; pancreas; prostate; thyroid; cervix; ovary; mammary gland; uterus; testis; connective tissue; kidney; mouth; lymph node; bone; bladder; ascites; salivary gland; stomach; nerve; ganglia; pineal gland; vascular; pituitary gland

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UGID:151296 UniGene Hs.143766 Homo sapiens (human) ATN1

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Atrophin 1 (ATN1)

SELECTED PROTEIN SIMILARITIES

Comparison of sequences in UniGene with selected protein reference sequences. The alignments can suggest function of a gene.

Reference Protein		Species	Id(%)	Len(aa)
NP_001931.2	atrophin-1	H. sapiens	100.0	1189
NP_001078961.1	arginine glutamic acid dipeptide (RE) repeats	M. musculus	58.7	1004

GENE EXPRESSION

Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.

MAPPING POSITION

Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.

	Chromosome:	12
	Map position:	12p13.31

SEQUENCES

Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (7)

BC051795.2	Homo sapiens atrophin 1, mRNA (cDNA clone MGC:57647 IMAGE:4181592), complete cds	PA
NM_001940.3	Homo sapiens atrophin 1 (ATN1), transcript variant 2, mRNA	PA
NM_001007026.1	Homo sapiens atrophin 1 (ATN1), transcript variant 1, mRNA	PA
U23851.1	Human atrophin-1 mRNA, complete cds	P
Z22814.1	H.sapiens ORF, complete CDS	P
D38529.1	Homo sapiens mRNA for DRPLA protein, complete cds	PA
D31840.1	Homo sapiens DRPLA mRNA, complete cds	P

EST sequences (10 of 467) [Show all sequences]

AA985328.1	Clone IMAGE:1629360	brain	3' read	P
AA988158.1	Clone IMAGE:1603252	lung	3' read
AA988480.1	Clone IMAGE:1602997	lung	3' read
AI014861.1	Clone IMAGE:1622109	embryonic tissue	3' read
AI023481.1	Clone IMAGE:1654627	mixed	3' read
AI050664.1	Clone IMAGE:1639952	testis	3' read
AI056916.1	Clone IMAGE:1669611	brain	3' read
AI082449.1	Clone IMAGE:1661961	mixed	3' read	A
AI092095.1	Clone IMAGE:1690916	mixed	3' read	P
AI084480.1	Clone IMAGE:1662472	mixed	3' read

Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria