GABA(A) receptor-associated protein, Homo sapiens

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Finding cDNAs

UGID:2478045 UniGene Hs.647421 Homo sapiens (human) GABARAP

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GABA(A) receptor-associated protein (GABARAP)

SELECTED PROTEIN SIMILARITIES

Comparison of sequences in UniGene with selected protein reference sequences. The alignments can suggest function of a gene.

Reference Protein		Species	Id(%)	Len(aa)
XP_001107079.1	PREDICTED: GABA(A) receptor-associated protein isoform 3	M. mulatta	100.0	116
XP_001169691.1	PREDICTED: similar to Chain A, Solution Structure Of Human Gaba Receptor Associated Protein Gabarap isoform 3	P. troglodytes	100.0	116
XP_913549.1	PREDICTED: similar to Chain A, Solution Structure Of Human Gaba Receptor Associated Protein Gabarap	M. musculus	83.5	102
NP_192371.1	ATG8B (AUTOPHAGY 8B); microtubule binding	A. thaliana	60.3	116

GENE EXPRESSION

Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.

	Expression Profile:	View expression levels using UniGene's EST ProfileViewer [Show more entries with profiles like this]
	GEO profiles:	Gene expression profiles in the NCBI Gene Expression Omnibus database
	cDNA Sources:	brain; prostate; pancreas; thyroid; lung; eye; mixed; mammary gland; uterus; placenta; kidney; skin; embryonic tissue; blood; heart; testis; uncharacterized tissue; ear; muscle; ovary; pharynx; liver; bone marrow; larynx; connective tissue; intestine; epididymis; stomach; bladder; adrenal gland; spinal cord; adipose tissue; lymph node; bone; tonsil; amniotic fluid; vascular; pituitary gland; cervix; ascites; lymph; pineal gland; spleen; thymus; salivary gland; nerve; umbilical cord; mouth; parathyroid

MAPPING POSITION

Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.

	Chromosome:	17
	Map position:	17p13.1

SEQUENCES

Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (16)

AF044671.1	Homo sapiens MM46 mRNA, complete cds	P
NM_007278.1	Homo sapiens GABA(A) receptor-associated protein (GABARAP), mRNA	PA
CR457043.1	Homo sapiens full open reading frame cDNA clone RZPDo834C0515D for gene GABARAP, GABA(A) receptor-associated protein; complete cds, incl. stopcodon	P
CR542235.1	Homo sapiens full open reading frame cDNA clone RZPDo834G0625D for gene GABARAP, GABA(A) receptor-associated protein; complete cds, without stopcodon	P
CR624246.1	full-length cDNA clone CS0DE003YG22 of Placenta of Homo sapiens (human)	P
CR597728.1	full-length cDNA clone CS0DN004YC16 of Adult brain of Homo sapiens (human)	P
CR592433.1	full-length cDNA clone CS0DN003YE11 of Adult brain of Homo sapiens (human)	P
AF161586.1	Homo sapiens GABA-A receptor-associated protein (GABARAP) mRNA, complete cds	P
AF183425.1	Homo sapiens HT004 protein mRNA, complete cds	PA
BC106748.1	Homo sapiens GABA(A) receptor-associated protein, mRNA (cDNA clone MGC:120154 IMAGE:40022383), complete cds	P
BC106749.1	Homo sapiens GABA(A) receptor-associated protein, mRNA (cDNA clone MGC:120155 IMAGE:40022384), complete cds	P
AB030711.1	Homo sapiens FLC3B mRNA for MAP1 light chain 3 related protein, complete cds	PA
AK312205.1	Homo sapiens cDNA, FLJ92494, highly similar to Homo sapiens GABA(A) receptor-associated protein (GABARAP), mRNA
AK098634.1	Homo sapiens cDNA FLJ25768 fis, clone TST06391, highly similar to GABA(A) receptor-associated protein	P
AF067171.1	Homo sapiens ganglioside expression factor 2 homolog mRNA, complete cds	PA
AL050182.1	Homo sapiens mRNA; cDNA DKFZp586A1923 (from clone DKFZp586A1923)	PA

EST sequences (10 of 1073) [Show all sequences]

AA970318.1	Clone IMAGE:1573009	kidney	3' read	A
AA971047.1	Clone IMAGE:1575326	kidney	3' read	A
AA977393.1	Clone IMAGE:1589049	kidney	3' read	A
AA991335.1	Clone IMAGE:1607012	mammary gland	3' read	A
AA885797.1	Clone IMAGE:1500277	lung	3' read	A
AI039883.1	Clone IMAGE:1664261	skin	3' read	PA
AI076870.1	Clone IMAGE:1670264	brain	3' read	A
AI077676.1	Clone IMAGE:1664474	skin	3' read	A
AI139451.1	Clone IMAGE:1710181	heart	3' read	A
AI139644.1	Clone IMAGE:1710938	uterus	3' read	A

Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria