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Finding cDNAs
UGID:687717     UniGene Hs.472558     Homo sapiens (human)   ERGIC3 Order cDNA clone, Links
ERGIC and golgi 3 (ERGIC3)
SELECTED PROTEIN SIMILARITIES
Comparison of sequences in UniGene with selected protein reference sequences. The alignments can suggest function of a gene.
Reference ProteinSpeciesId(%)Len(aa)
XP_001098885.1 PREDICTED: ERGIC and golgi 3 isoform 2 M. mulatta 100.0 387
NP_938408.1 serologically defined breast cancer antigen 84 isoform a H. sapiens 100.0 387
NP_079792.1 ERGIC and golgi 3 M. musculus 99.7 382
NP_001100003.1 ERGIC and golgi 3 R. norvegicus 99.7 382
NP_001028277.1 ERGIC and golgi 3 isoform 1 D. rerio 92.5 387
NP_001087591.1 MGC83277 protein X. laevis 91.8 388
NP_564467.2 unknown protein A. thaliana 61.5 383
XP_001693564.1 predicted protein C. reinhardtii 57.4 383
NP_648758.1 CG7011 CG7011-PA D. melanogaster 51.1 368
NP_510575.1 yeast ERV (ER to Golgi transport Vesicle protein) homolog family member (erv-46) C. elegans 47.9 379
XP_329731.1 hypothetical protein N. crassa 45.0 443

GENE EXPRESSION
Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.
Expression Profile: View expression levels using UniGene's EST ProfileViewer
[Show more entries with profiles like this]
Note: Highly represented in several libraries
GEO profiles: Gene expression profiles in the NCBI Gene Expression Omnibus database
cDNA Sources: intestine; brain; mixed; lung; skin; ovary; mammary gland; placenta; embryonic tissue; liver; kidney; eye; testis; pancreas; prostate; uterus; thyroid; blood; uncharacterized tissue; stomach; bone marrow; cervix; larynx; ascites; bone; heart; mouth; adrenal gland; muscle; spinal cord; lymph; trachea; lymph node; pharynx; adipose tissue; connective tissue; parathyroid; pituitary gland; esophagus; spleen; vascular; amniotic fluid; salivary gland; nerve; pineal gland; umbilical cord
MAPPING POSITION
Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.
Chromosome: 20
Map position: 20pter-q12
UniSTS entry: Chr 20 REN58153
UniSTS entry: Chr 20 (n/a)
UniSTS entry: Chr 20 RH93363
UniSTS entry: Chr 20 REN58168
UniSTS entry: Chr 20 REN58156
UniSTS entry: Chr 20 REN58198
UniSTS entry: Chr 20 ECD13482
UniSTS entry: Chr 20 REN58199
UniSTS entry: Chr 20 REN58200
UniSTS entry: Chr 20 REN58167
SEQUENCES
Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (26)

AF091085.1 Homo sapiens clone 638 unknown mRNA, complete sequence PA
NM_198398.1 Homo sapiens ERGIC and golgi 3 (ERGIC3), transcript variant 1, mRNA PA
AL161963.1 Homo sapiens mRNA; cDNA DKFZp547A2190 (from clone DKFZp547A2190) PA
CR623909.1 full-length cDNA clone CS0DI016YJ16 of Placenta Cot 25-normalized of Homo sapiens (human) P
CR622738.1 full-length cDNA clone CS0DI071YH19 of Placenta Cot 25-normalized of Homo sapiens (human) P
CR615343.1 full-length cDNA clone CS0DJ007YI23 of T cells (Jurkat cell line) Cot 10-normalized of Homo sapiens (human) P
CR614105.1 full-length cDNA clone CS0DK007YC11 of HeLa cells Cot 25-normalized of Homo sapiens (human) P
CR613283.1 full-length cDNA clone CS0DK010YH10 of HeLa cells Cot 25-normalized of Homo sapiens (human) P
CR612111.1 full-length cDNA clone CS0DK012YJ23 of HeLa cells Cot 25-normalized of Homo sapiens (human) P
CR610449.1 full-length cDNA clone CS0DC001YM24 of Neuroblastoma Cot 25-normalized of Homo sapiens (human) P
CR607525.1 full-length cDNA clone CS0DI059YC17 of Placenta Cot 25-normalized of Homo sapiens (human) P
CR604308.1 full-length cDNA clone CS0DI087YM07 of Placenta Cot 25-normalized of Homo sapiens (human) P
CR602704.1 full-length cDNA clone CS0DI065YE12 of Placenta Cot 25-normalized of Homo sapiens (human) P
CR600670.1 full-length cDNA clone CS0DC013YC09 of Neuroblastoma Cot 25-normalized of Homo sapiens (human) P
CR599797.1 full-length cDNA clone CS0DI061YC22 of Placenta Cot 25-normalized of Homo sapiens (human) P
CR592617.1 full-length cDNA clone CS0DJ001YG10 of T cells (Jurkat cell line) Cot 10-normalized of Homo sapiens (human) P
CR591725.1 full-length cDNA clone CS0DD008YE10 of Neuroblastoma Cot 50-normalized of Homo sapiens (human) P
NM_015966.2 Homo sapiens ERGIC and golgi 3 (ERGIC3), transcript variant 2, mRNA PA
AF151812.1 Homo sapiens CGI-54 protein mRNA, complete cds P
EF206690.1 Homo sapiens endoplasmic reticulum-localized protein ERp43 mRNA, complete cds P
BC009765.1 Homo sapiens ERGIC and golgi 3, mRNA (cDNA clone MGC:13325 IMAGE:4283844), complete cds PA
BC014014.2 Homo sapiens ERGIC and golgi 3, mRNA (cDNA clone MGC:19896 IMAGE:3954269), complete cds PA
AK300916.1 Homo sapiens cDNA FLJ56701 complete cds, highly similar to Endoplasmic reticulum-Golgi intermediate compartment protein 3 P
AK074550.1 Homo sapiens cDNA FLJ90069 fis, clone HEMBA1003945, highly similar to Serologically defined breast cancer antigen 84 P
AF077030.1 Homo sapiens hypothetical 43.2 Kd protein mRNA, complete cds PA
AF116614.1 Homo sapiens PRO0989 mRNA, complete cds PA

EST sequences (10 of 1206) [Show all sequences]

AA954559.1 Clone IMAGE:1562370 mixed 3' read P
AA977681.1 Clone IMAGE:1558372 lung 3' read
R16572.1 Clone IMAGE:129650 mixed 3' read P
R16631.1 Clone IMAGE:129650 mixed 5' read P
AA902522.1 Clone IMAGE:1502492 kidney 3' read P
AA926675.1 Clone IMAGE:1541982 mixed 3' read P
AI014547.1 Clone IMAGE:1628780 mixed 3' read P
AI017451.1 Clone IMAGE:1627084 mixed 3' read P
AI018481.1 Clone IMAGE:1642024 testis 3' read P
AA907646.1 Clone IMAGE:1542556 mixed 3' read P


Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria

 
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