NCBI UniGene banner graphic
PubMed Nucleotide Protein Genome Structure Popset Taxonomy
 Search
NCBI

UniGene
Homepage
FAQs
Query Tips
Library Browser
DDD
Download UniGene

Related Databases
Gene
HomoloGene
dbEST
Trace Archive

NIH cDNA Projects
MGC | ZGC | XGC
Finding cDNAs
UGID:241297     UniGene Hs.446260     Homo sapiens (human)   PSMA6 Order cDNA clone, Links
Proteasome (prosome, macropain) subunit, alpha type, 6 (PSMA6)
SELECTED PROTEIN SIMILARITIES
Comparison of sequences in UniGene with selected protein reference sequences. The alignments can suggest function of a gene.
Reference ProteinSpeciesId(%)Len(aa)
XP_509906.1 PREDICTED: proteasome alpha 6 subunit isoform 6 P. troglodytes 100.0 245
XP_862262.1 PREDICTED: similar to Proteasome subunit alpha type 6 (Proteasome iota chain) (Macropain iota chain) (Multicatalytic endopeptidase complex iota chain) isoform 8 C. lupus familiaris 100.0 245

GENE EXPRESSION
Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.
Expression Profile: View expression levels using UniGene's EST ProfileViewer
[Show more entries with profiles like this]
Note: Highly represented (1.3 pct) in cDNA library dbEST:9495, RT0026.
GEO profiles: Gene expression profiles in the NCBI Gene Expression Omnibus database
cDNA Sources: lung; brain; prostate; skin; mixed; uncharacterized tissue; intestine; thymus; blood; parathyroid; testis; liver; eye; connective tissue; larynx; placenta; thyroid; bladder; uterus; lymph; mammary gland; bone marrow; embryonic tissue; ascites; kidney; heart; muscle; bone; pancreas; ovary; salivary gland; pharynx; pituitary gland; stomach; adrenal gland; esophagus; vascular; adipose tissue; cervix; lymph node; spleen; mouth; umbilical cord; spinal cord
MAPPING POSITION
Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.
Chromosome: 14
Map position: 14q13
SEQUENCES
Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (19)

BC070137.1 Homo sapiens proteasome (prosome, macropain) subunit, alpha type, 6, mRNA (cDNA clone MGC:88117 IMAGE:6458246), complete cds PA
CR456944.1 Homo sapiens full open reading frame cDNA clone RZPDo834A115D for gene PSMA6, proteasome (prosome, macropain) subunit, alpha type, 6; complete cds, incl. stopcodon P
CR616921.1 full-length cDNA clone CS0DI023YJ18 of Placenta Cot 25-normalized of Homo sapiens (human) P
CR616376.1 full-length cDNA clone CS0DH003YJ14 of T cells (Jurkat cell line) of Homo sapiens (human) P
CR606392.1 full-length cDNA clone CS0DD009YJ17 of Neuroblastoma Cot 50-normalized of Homo sapiens (human) P
CR593894.1 full-length cDNA clone CS0DI085YH24 of Placenta Cot 25-normalized of Homo sapiens (human) P
CR593415.1 full-length cDNA clone CS0DB007YI03 of Neuroblastoma Cot 10-normalized of Homo sapiens (human) P
CR592479.1 full-length cDNA clone CS0DC029YJ05 of Neuroblastoma Cot 25-normalized of Homo sapiens (human) P
AB209589.1 Homo sapiens mRNA for proteasome alpha 6 subunit variant protein P
BC002979.1 Homo sapiens proteasome (prosome, macropain) subunit, alpha type, 6, mRNA (cDNA clone MGC:2333 IMAGE:3542966), complete cds PA
BC017882.1 Homo sapiens proteasome (prosome, macropain) subunit, alpha type, 6, mRNA (cDNA clone MGC:22756 IMAGE:4278372), complete cds PA
BC022354.1 Homo sapiens proteasome (prosome, macropain) subunit, alpha type, 6, mRNA (cDNA clone MGC:23846 IMAGE:4292526), complete cds PA
AK313011.1 Homo sapiens cDNA, FLJ93476, Homo sapiens proteasome (prosome, macropain) subunit, alpha type, 6(PSMA6), mRNA
AK298920.1 Homo sapiens cDNA FLJ52022 complete cds, highly similar to Proteasome subunit alpha type 6 (EC 3.4.25.1)
AK302008.1 Homo sapiens cDNA FLJ51729 complete cds, highly similar to Proteasome subunit alpha type 6 (EC 3.4.25.1) A
X61972.1 H.sapiens mRNA for macropain subunit iota PA
X59417.1 H.sapiens PROS-27 mRNA PA
NM_002791.1 Homo sapiens proteasome (prosome, macropain) subunit, alpha type, 6 (PSMA6), mRNA PA
BC023659.1 Homo sapiens proteasome (prosome, macropain) subunit, alpha type, 6, mRNA (cDNA clone MGC:29618 IMAGE:4869452), complete cds PA

EST sequences (10 of 951) [Show all sequences]

AA903675.1 Clone IMAGE:1517728 uncharacterized tissue 3' read PA
AA973433.1 Clone IMAGE:1569056 lung 3' read PA
AA989387.1 Clone IMAGE:1606158 kidney 3' read P
AI001105.1 Clone IMAGE:1613163 uncharacterized tissue 3' read PA
AI014835.1 Clone IMAGE:1623806 embryonic tissue 3' read PA
AI024374.1 Clone IMAGE:1643203 testis 3' read P
AI026047.1 Clone IMAGE:1647247 parathyroid 3' read PA
AI026764.1 Clone IMAGE:1644729 testis 3' read PA
AI032172.1 Clone IMAGE:1635465 kidney 3' read A
AI032881.1 Clone IMAGE:1646752 parathyroid 3' read PA


Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria

 
NLM | NIH | UniGene | Privacy Statement | Disclaimer | NCBI Help