Sema domain, seven thrombospondin repeats (type 1 and type 1-like), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 5A, Homo sapiens

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UGID:135448 UniGene Hs.27621 Homo sapiens (human) SEMA5A

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Sema domain, seven thrombospondin repeats (type 1 and type 1-like), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 5A (SEMA5A)

SELECTED PROTEIN SIMILARITIES

Comparison of sequences in UniGene with selected protein reference sequences. The alignments can suggest function of a gene.

Reference Protein		Species	Id(%)	Len(aa)
NP_001101129.1	semaphorin 5A	R. norvegicus	94.7	1073
XP_848441.1	PREDICTED: similar to semaphorin 5A isoform 2	C. lupus familiaris	94.2	1072

GENE EXPRESSION

Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.

	Expression Profile:	View expression levels using UniGene's EST ProfileViewer [Show more entries with profiles like this]
	GEO profiles:	Gene expression profiles in the NCBI Gene Expression Omnibus database
	cDNA Sources:	brain; uncharacterized tissue; pharynx; eye; uterus; mixed; embryonic tissue; larynx; testis; skin; heart; kidney; placenta; ear; trachea; intestine; spleen; bone; pancreas; stomach; lung; mammary gland; ovary; esophagus; thyroid; prostate; mouth; bladder; muscle; connective tissue; bone marrow; lymph node; nerve; blood; ganglia

MAPPING POSITION

Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.

	Chromosome:	5
	Map position:	5p15.2

SEQUENCES

Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (10)

NM_003966.2	Homo sapiens sema domain, seven thrombospondin repeats (type 1 and type 1-like), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 5A (SEMA5A), mRNA	A
CR617973.1	full-length cDNA clone CS0DI022YI22 of Placenta Cot 25-normalized of Homo sapiens (human)
AK022877.1	Homo sapiens cDNA FLJ12815 fis, clone NT2RP2002546
BC115696.1	Homo sapiens sema domain, seven thrombospondin repeats (type 1 and type 1-like), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 5A, mRNA (cDNA clone MGC:133317 IMAGE:40038868), complete cds	P
U52840.1	Homo sapiens semaphorin F homolog mRNA, complete cds	P
AK307587.1	Homo sapiens cDNA, FLJ97535
AK293441.1	Homo sapiens cDNA FLJ56616 complete cds, highly similar to Semaphorin-5A precursor
AF056434.1	Homo sapiens clone FBD8 Cri-du-chat critical region mRNA
AF009261.1	Homo sapiens clone FB2B10 Cri-du-chat region mRNA
AF009314.1	Homo sapiens clone TUA8 Cri-du-chat region mRNA	A

EST sequences (10 of 273) [Show all sequences]

AA968935.1	Clone IMAGE:1579116	mixed	3' read	A
R20486.1	Clone IMAGE:35841	brain	5' read
AI127735.1	Clone IMAGE:1711176	uterus	3' read	A
CB049996.1	Clone IMAGE:3271755	prostate	3' read	A
CB049997.1	Clone IMAGE:3271755	prostate	5' read
AI149107.1	Clone IMAGE:1721050	uterus	3' read
BX101681.1	Clone IMAGp998C221779_;_IMAGE:725325	ovary		A
BX115785.1	Clone IMAGp998G21148_;_IMAGE:29996	brain		A
BX093167.1	Clone IMAGp998N20699_;_IMAGE:310867	skin		A
AI186523.1	Clone IMAGE:1731443	heart	3' read

Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria