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Finding cDNAs
UGID:682443     UniGene Hs.467284     Homo sapiens (human)   Links
Transcribed locus, strongly similar to NP_957146.1 ribosomal protein S9 [Danio rerio]
SELECTED PROTEIN SIMILARITIES
Comparison of sequences in UniGene with selected protein reference sequences. The alignments can suggest function of a gene.
Reference ProteinSpeciesId(%)Len(aa)
NP_084043.1 ribosomal protein S9-like M. musculus 100.0 193
NP_112370.2 ribosomal protein S9 R. norvegicus 100.0 193
NP_001006813.1 ribosomal protein S9 X. tropicalis 100.0 193
XP_001082895.1 PREDICTED: similar to 40S ribosomal protein S9 M. mulatta 100.0 193
XP_001174947.1 PREDICTED: similar to Ribosomal protein S9 isoform 4 P. troglodytes 100.0 193
NP_001004.2 ribosomal protein S9 H. sapiens 100.0 193
XP_533590.2 PREDICTED: similar to 40S ribosomal protein S9 C. lupus familiaris 100.0 193
XP_001488074.1 PREDICTED: similar to ribosomal protein S9 E. caballus 100.0 193
NP_001094622.1 ribosomal protein S9 B. taurus 100.0 193
XP_001506470.1 PREDICTED: similar to microsomal NAD+-dependent retinol dehydrogenase 4 O. anatinus 100.0 135
NP_001080124.1 ribosomal protein S9 X. laevis 99.5 193
NP_957146.1 ribosomal protein S9 D. rerio 97.9 193
NP_524004.2 Ribosomal protein S9 CG3395-PA, isoform A D. melanogaster 94.7 186
NP_496384.1 Ribosomal Protein, Small subunit family member (rps-9) C. elegans 88.5 182
XP_329139.1 hypothetical protein N. crassa 85.2 188
XP_001702303.1 ribosomal protein S9, component of cytosolic 80S ribosome and 40S small subunit C. reinhardtii 82.1 189
NP_197024.1 40S ribosomal protein S9 (RPS9B) A. thaliana 79.9 193
NP_009748.1 Protein component of the small (40S) ribosomal subunit; nearly identical to Rps9Ap and has similarity to E. coli S4 and rat S9 ribosomal proteins; Rps9bp S. cerevisiae 79.1 190

GENE EXPRESSION
Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.
Expression Profile: View expression levels using UniGene's EST ProfileViewer
[Show more entries with profiles like this]
Note: Highly represented (1.3 pct) in cDNA library dbEST:9372, MT0286.
Note: Highly represented (1.1 pct) in cDNA library dbEST:7908, EN0085.
GEO profiles: Gene expression profiles in the NCBI Gene Expression Omnibus database
cDNA Sources: lung; pancreas; brain; eye; uterus; embryonic tissue; skin; placenta; ovary; thyroid; nerve; tonsil; larynx; thymus; bladder; lymph; ascites; liver; prostate; intestine; testis; blood; mammary gland; bone; lymph node; cervix; pituitary gland; connective tissue; mixed; uncharacterized tissue; kidney; vascular; muscle; stomach; heart; spleen; bone marrow; mouth; salivary gland; umbilical cord; adrenal gland; pineal gland; adipose tissue; amniotic fluid; parathyroid
MAPPING POSITION
Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.
Chromosome: 22
UniSTS entry: Chr 22 (n/a)
UniSTS entry: Chr 19 SHGC-31670 [Map Viewer]
UniSTS entry: Chr 19 REN91952
UniSTS entry: Chr 19 REN91954
UniSTS entry: Chr 19 REN91955
SEQUENCES
Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (3)

CR605850.1 full-length cDNA clone CS0DJ014YF13 of T cells (Jurkat cell line) Cot 10-normalized of Homo sapiens (human) P
CR605369.1 full-length cDNA clone CS0DA003YH10 of Neuroblastoma of Homo sapiens (human) P
BC020462.1 Homo sapiens ribosomal protein S9, mRNA (cDNA clone IMAGE:3856008) PA

EST sequences (10 of 804) [Show all sequences]

AA975744.1 Clone IMAGE:1591109 kidney 3' read
AA984864.1 Clone IMAGE:1576595 spleen 3' read PA
AA984959.1 Clone IMAGE:1576733 spleen 3' read P
AA985565.1 Clone IMAGE:1601189 lung 3' read PA
AA989143.1 Clone IMAGE:1593489 kidney 3' read PA
AI028368.1 Clone IMAGE:1645217 testis 3' read PA
AI051894.1 Clone IMAGE:1648765 parathyroid 3' read PA
AI074050.1 Clone IMAGE:1681915 skin 3' read PA
AI095889.1 Clone IMAGE:1697831 uterus 3' read PA
AI126398.1 Clone IMAGE:1713545 placenta 3' read PA


Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria

 
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