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Finding cDNAs
UGID:238951     UniGene Hs.443914     Homo sapiens (human)   SOD1 Order cDNA clone, Links
Superoxide dismutase 1, soluble (SOD1)
SELECTED PROTEIN SIMILARITIES
Comparison of sequences in UniGene with selected protein reference sequences. The alignments can suggest function of a gene.
Reference ProteinSpeciesId(%)Len(aa)
NP_001021956.1 SOD (superoxide dismutase) family member (sod-1) C. elegans 64.8 165
NP_172360.1 CSD1 (COPPER/ZINC SUPEROXIDE DISMUTASE 1); copper, zinc superoxide dismutase A. thaliana 58.7 149
NP_001033939.1 CG9027 CG9027-PC, isoform C D. melanogaster 58.2 181

GENE EXPRESSION
Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.
Expression Profile: View expression levels using UniGene's EST ProfileViewer
[Show more entries with profiles like this]
Note: Highly represented (1.8 pct) in cDNA library dbEST:6579, CT0465.
Note: Highly represented (1.4 pct) in cDNA library dbEST:3624, ST0220.
Note: Highly represented (1.3 pct) in cDNA library dbEST:4603, NT0028.
GEO profiles: Gene expression profiles in the NCBI Gene Expression Omnibus database
cDNA Sources: brain; pancreas; lung; mixed; eye; liver; skin; uterus; placenta; testis; prostate; intestine; uncharacterized tissue; stomach; connective tissue; bladder; pharynx; lymph; adipose tissue; ascites; heart; embryonic tissue; ovary; lymph node; adrenal gland; blood; mammary gland; bone; kidney; muscle; vascular; trachea; bone marrow; mouth; salivary gland; pituitary gland; spinal cord; thymus; ear; cervix; thyroid; parathyroid; esophagus; spleen; umbilical cord; tonsil; ganglia; nerve; pineal gland
MAPPING POSITION
Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.
Chromosome: 21
Map position: 21q22.1|21q22.11
SEQUENCES
Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (16)

BT006676.1 Homo sapiens superoxide dismutase 1, soluble (amyotrophic lateral sclerosis 1 (adult)) mRNA, complete cds P
NM_000454.4 Homo sapiens superoxide dismutase 1, soluble (SOD1), mRNA PA
AY450286.1 Homo sapiens superoxide dismutase (SOD) mRNA, complete cds P
CR450355.1 Homo sapiens full open reading frame cDNA clone RZPDo834A053D for gene SOD1, superoxide dismutase 1, soluble (amyotrophic lateral sclerosis 1 (adult)); complete cds; without stopcodon P
CR541742.1 Homo sapiens full open reading frame cDNA clone RZPDo834E0529D for gene SOD1, superoxide dismutase 1, soluble (amyotrophic lateral sclerosis 1 (adult)); complete cds, incl. stopcodon P
CR624343.1 full-length cDNA clone CS0DC018YI22 of Neuroblastoma Cot 25-normalized of Homo sapiens (human) P
CR621637.1 full-length cDNA clone CS0DC029YC06 of Neuroblastoma Cot 25-normalized of Homo sapiens (human) P
CR613850.1 full-length cDNA clone CS0DI013YA08 of Placenta Cot 25-normalized of Homo sapiens (human) P
CR600386.1 full-length cDNA clone CS0DK008YL11 of HeLa cells Cot 25-normalized of Homo sapiens (human) P
CR594020.1 full-length cDNA clone CS0DI054YA23 of Placenta Cot 25-normalized of Homo sapiens (human) P
BC001034.1 Homo sapiens superoxide dismutase 1, soluble, mRNA (cDNA clone MGC:2325 IMAGE:3140145), complete cds PA
EF151142.1 Homo sapiens superoxide dismutase 1 (SOD1) mRNA, complete cds
EF143990.1 Homo sapiens superoxide dismutase 1 (SOD1) mRNA, partial cds
AY049787.1 Homo sapiens soluble superoxide dismutase 1 (SOD1) gene, complete cds P
AK312116.1 Homo sapiens cDNA, FLJ92398, Homo sapiens superoxide dismutase 1, soluble (amyotrophic lateral sclerosis 1 (adult)) (SOD1), mRNA
X02317.1 Human mRNA for Cu/Zn superoxide dismutase (SOD) P

EST sequences (10 of 1445) [Show all sequences]

AA961435.1 Clone IMAGE:1599566 uncharacterized tissue 3' read P
AA961798.1 Clone IMAGE:1598407 uncharacterized tissue 3' read
AA984876.1 Clone IMAGE:1576622 spleen 3' read A
AA994301.1 Clone IMAGE:1631239 mammary gland 3' read P
AA908860.1 Clone IMAGE:1522713 lung 3' read PA
AI023156.1 Clone IMAGE:1651753 skin 3' read A
AI023204.1 Clone IMAGE:1643415 testis 3' read P
AI027606.1 Clone IMAGE:1645436 testis 3' read P
AI027925.1 Clone IMAGE:1645493 testis 3' read
AI031921.1 Clone IMAGE:1650004 parathyroid 3' read PA


Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria

 
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