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Finding cDNAs
UGID:183552     UniGene Hs.310781     Homo sapiens (human)   C5orf45 Links
Chromosome 5 open reading frame 45 (C5orf45)
SELECTED PROTEIN SIMILARITIES
Comparison of sequences in UniGene with selected protein reference sequences. The alignments can suggest function of a gene.
Reference ProteinSpeciesId(%)Len(aa)
NP_057259.2 hypothetical protein LOC51149 isoform 1 H. sapiens 100.0 342
NP_998338.1 Sequestosome 1 D. rerio 76.0 129
NP_001079920.1 hypothetical protein LOC379610 X. laevis 72.8 136
NP_080819.1 hypothetical protein LOC68067 M. musculus 66.0 334

GENE EXPRESSION
Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.
Expression Profile: View expression levels using UniGene's EST ProfileViewer
[Show more entries with profiles like this]
Note: Highly represented in many libraries
GEO profiles: Gene expression profiles in the NCBI Gene Expression Omnibus database
cDNA Sources: lung; brain; placenta; mammary gland; skin; ovary; kidney; muscle; pancreas; liver; uncharacterized tissue; thyroid; uterus; eye; esophagus; lymph node; bone marrow; mixed; ear; adipose tissue; intestine; embryonic tissue; amniotic fluid; prostate; spleen; heart; bladder; connective tissue; testis; blood; vascular; mouth; trachea; thymus; tonsil; parathyroid; adrenal gland; ascites; larynx; stomach; lymph; salivary gland; bone; cervix; epididymis; pituitary gland; umbilical cord; nerve
MAPPING POSITION
Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.
Chromosome: 5
Map position: 5q35.3
UniSTS entry: Chr 5 RH18060
UniSTS entry: Chr 5 A002O27
UniSTS entry: Chr 5 D5S2306E
UniSTS entry: Chr 5 A008T21
UniSTS entry: Chr 5 SHGC-33017
UniSTS entry: SGC31697
UniSTS entry: Chr Y D3S4354
UniSTS entry: Chr Y D10S16
UniSTS entry: Chr 5 (n/a)
UniSTS entry: Chr 5 RH70719
SEQUENCES
Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (9)

BC050714.1 Homo sapiens chromosome 5 open reading frame 45, mRNA (cDNA clone IMAGE:6146837), with apparent retained intron PA
BX537968.1 Homo sapiens mRNA; cDNA DKFZp686L2452 (from clone DKFZp686L2452) PA
BC056889.1 Homo sapiens hypothetical LOC51149, mRNA (cDNA clone IMAGE:5764392) PA
BC069051.1 Homo sapiens chromosome 5 open reading frame 45, mRNA (cDNA clone MGC:78537 IMAGE:3945859), complete cds PA
NM_016175.3 Homo sapiens chromosome 5 open reading frame 45 (C5orf45), transcript variant 1, mRNA PA
AF153685.1 Homo sapiens truncated calcium binding protein mRNA, complete cds PA
CR936785.1 Homo sapiens mRNA; cDNA DKFZp781O2341 (from clone DKFZp781O2341) PA
NM_001017987.2 Homo sapiens chromosome 5 open reading frame 45 (C5orf45), transcript variant 2, mRNA PA
BC002739.2 Homo sapiens chromosome 5 open reading frame 45, mRNA (cDNA clone IMAGE:3631869), partial cds PA

EST sequences (10 of 800) [Show all sequences]

AA977521.1 Clone IMAGE:1561095 mixed 3' read PA
AI026027.1 Clone IMAGE:1645755 parathyroid 3' read P
CA971149.1 Clone IMAGE:6557209 mixed 5' read
R23705.1 Clone IMAGE:131753 placenta 5' read
CB052947.1 Clone IMAGE:3290496 uncharacterized tissue 5' read
AI159748.1 Clone IMAGE:1721829 uterus 3' read
AI185233.1 Clone IMAGE:1742134 lung 3' read PA
R25436.1 Clone IMAGE:132288 placenta 5' read
AI192502.1 Clone IMAGE:1743442 lung 3' read PA
AI214055.1 Clone IMAGE:1956775 brain 3' read


Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria

 
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