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Finding cDNAs
UGID:152970     UniGene Hs.148272     Homo sapiens (human)   CCM2 Order cDNA clone, Links
Cerebral cavernous malformation 2 (CCM2)
SELECTED PROTEIN SIMILARITIES
Comparison of sequences in UniGene with selected protein reference sequences. The alignments can suggest function of a gene.
Reference ProteinSpeciesId(%)Len(aa)
NP_001025006.1 cerebral cavernous malformation 2 isoform 1 H. sapiens 100.0 464
XP_519079.2 PREDICTED: cerebral cavernous malformation 2 P. troglodytes 99.8 475
NP_666126.1 cerebral cavernous malformation 2 homolog M. musculus 97.8 452
NP_001002315.1 cerebral cavernous malformation 2 D. rerio 84.5 451

GENE EXPRESSION
Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.
Expression Profile: View expression levels using UniGene's EST ProfileViewer
[Show more entries with profiles like this]
GEO profiles: Gene expression profiles in the NCBI Gene Expression Omnibus database
cDNA Sources: brain; thymus; uncharacterized tissue; blood; prostate; placenta; eye; bone marrow; esophagus; tonsil; stomach; trachea; adrenal gland; skin; thyroid; lung; ovary; mixed; mammary gland; uterus; lymph node; lymph; intestine; kidney; connective tissue; pancreas; pharynx; spleen; liver; salivary gland; embryonic tissue; heart; cervix; bone; testis; vascular; ascites; bladder; muscle; ganglia; parathyroid
MAPPING POSITION
Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.
Chromosome: 7
Map position: 7p13
UniSTS entry: Chr 7 RH79690
UniSTS entry: Chr 7 RH79068
UniSTS entry: Chr 7 STS-T90101
UniSTS entry: Chr 7 GDB:1317296
SEQUENCES
Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (21)

AK124060.1 Homo sapiens cDNA FLJ42066 fis, clone SYNOV2007758, weakly similar to Halocynthia roretzi mRNA for HrPET-3 P
BC063663.1 Homo sapiens cerebral cavernous malformation 2, mRNA (cDNA clone IMAGE:3848511), complete cds PA
AF370392.1 Homo sapiens PP10187 mRNA, complete cds PA
CR621631.1 full-length cDNA clone CS0DM001YG07 of Fetal liver of Homo sapiens (human) P
CR618943.1 full-length cDNA clone CS0DI042YA18 of Placenta Cot 25-normalized of Homo sapiens (human) P
CR618439.1 full-length cDNA clone CS0DI030YI17 of Placenta Cot 25-normalized of Homo sapiens (human) P
CR618287.1 full-length cDNA clone CS0DM007YM09 of Fetal liver of Homo sapiens (human) P
CR607004.1 full-length cDNA clone CS0DL005YN04 of B cells (Ramos cell line) Cot 25-normalized of Homo sapiens (human) P
CR604060.1 full-length cDNA clone CS0DK003YH10 of HeLa cells Cot 25-normalized of Homo sapiens (human) P
CR602233.1 full-length cDNA clone CS0DC017YL02 of Neuroblastoma Cot 25-normalized of Homo sapiens (human) P
CR600732.1 full-length cDNA clone CS0DC029YA20 of Neuroblastoma Cot 25-normalized of Homo sapiens (human) P
CR599466.1 full-length cDNA clone CS0DI044YH06 of Placenta Cot 25-normalized of Homo sapiens (human) P
CR596053.1 full-length cDNA clone CS0DI026YB23 of Placenta Cot 25-normalized of Homo sapiens (human) P
NM_001029835.1 Homo sapiens cerebral cavernous malformation 2 (CCM2), transcript variant 1, mRNA PA
AK025807.1 Homo sapiens cDNA: FLJ22154 fis, clone HRC00201 PA
BC004903.2 Homo sapiens cerebral cavernous malformation 2, mRNA (cDNA clone MGC:4607 IMAGE:3501896), complete cds PA
NM_031443.3 Homo sapiens cerebral cavernous malformation 2 (CCM2), transcript variant 2, mRNA PA
BC008859.2 Homo sapiens cerebral cavernous malformation 2, mRNA (cDNA clone MGC:16657 IMAGE:4124185), complete cds PA
BC016832.2 Homo sapiens cerebral cavernous malformation 2, mRNA (cDNA clone MGC:2762 IMAGE:2924210), complete cds PA
BC025958.1 Homo sapiens cerebral cavernous malformation 2, mRNA (cDNA clone IMAGE:4587331), partial cds PA
AK098005.1 Homo sapiens cDNA FLJ40686 fis, clone THYMU2024071, highly similar to Malcavernin P

EST sequences (10 of 465) [Show all sequences]

AA903402.1 Clone IMAGE:1518538 uncharacterized tissue 3' read A
T05981.1 Clone HFBDK49 brain
AI129215.1 Clone IMAGE:1695033 uterus 3' read
AI220314.1 Clone IMAGE:1841964 mixed 3' read
CB105660.1 Clone L2HLK1-1-B01 liver 5' read P
CB123887.1 Clone L8SCK0-42-A12 liver 5' read P
CB140698.1 Clone L15CKK1-18-H06 liver 5' read P
CB216218.1 Clone IMAGE:5937927 uterus 5' read P
AI424429.1 Clone IMAGE:2094002 prostate 3' read A
AI494363.1 Clone IMAGE:2021481 uncharacterized tissue 3' read


Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria

 
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