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UGID:687010     UniGene Hs.471851     Homo sapiens (human)   HDLBP Order cDNA clone, Links
High density lipoprotein binding protein (HDLBP)
SELECTED PROTEIN SIMILARITIES
Comparison of sequences in UniGene with selected protein reference sequences. The alignments can suggest function of a gene.
Reference ProteinSpeciesId(%)Len(aa)
XP_001160227.1 PREDICTED: high density lipoprotein binding protein isoform 14 P. troglodytes 100.0 1267
NP_976221.1 high density lipoprotein binding protein H. sapiens 100.0 1267
XP_001503035.1 PREDICTED: similar to high density lipoprotein (HDL) binding protein E. caballus 99.6 1267
NP_742036.2 high density lipoprotein binding protein (vigilin) R. norvegicus 99.5 1267
NP_598569.1 high density lipoprotein binding protein M. musculus 99.5 1267
NP_001080165.1 high density lipoprotein binding protein (vigilin) X. laevis 87.9 1276
NP_958882.1 high density lipoprotein-binding protein (vigilin) D. rerio 86.5 1207
NP_523781.2 Dodeca-satellite-binding protein 1 CG5170-PC, isoform C D. melanogaster 55.5 1274

GENE EXPRESSION
Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.
Expression Profile: View expression levels using UniGene's EST ProfileViewer
[Show more entries with profiles like this]
Note: Highly represented in many libraries
GEO profiles: Gene expression profiles in the NCBI Gene Expression Omnibus database
cDNA Sources: testis; brain; lung; skin; embryonic tissue; uterus; intestine; mammary gland; pancreas; umbilical cord; uncharacterized tissue; placenta; liver; eye; prostate; kidney; muscle; pharynx; ovary; vascular; stomach; trachea; mixed; connective tissue; mouth; lymph node; heart; bone; lymph; thyroid; ascites; bone marrow; blood; cervix; nerve; larynx; salivary gland; adrenal gland; thymus; ganglia; spleen; parathyroid; bladder; tonsil; ear; amniotic fluid; adipose tissue; esophagus; epididymis; pituitary gland; pineal gland
MAPPING POSITION
Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.
Chromosome: 2
Map position: 2q37.3
UniSTS entry: Chr 2 IB1294
UniSTS entry: Chr 2 D2S180E
UniSTS entry: Chr 2 RH101
UniSTS entry: Chr 2 A005K34
UniSTS entry: Chr 2 RH104464
UniSTS entry: Chr 2 D2S2126
UniSTS entry: Chr 2 SGC30234
UniSTS entry: Chr 2 RH47030
UniSTS entry: Chr 2 D2S1516E
SEQUENCES
Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (19)

M64098.1 Human high density lipoprotein binding protein (HBP) mRNA, complete cds P
BX647759.1 Homo sapiens mRNA; cDNA DKFZp686N1331 (from clone DKFZp686N1331) PA
AK127833.1 Homo sapiens cDNA FLJ45936 fis, clone PLACE7004103, highly similar to Vigilin P
BC058826.1 Homo sapiens cDNA clone IMAGE:4292069, partial cds A
NM_005336.3 Homo sapiens high density lipoprotein binding protein (HDLBP), transcript variant 1, mRNA P
NM_203346.2 Homo sapiens high density lipoprotein binding protein (HDLBP), transcript variant 2, mRNA P
AK026138.1 Homo sapiens cDNA: FLJ22485 fis, clone HRC10901, highly similar to AF116718 Homo sapiens PRO2900 mRNA A
BC113120.1 Homo sapiens high density lipoprotein binding protein, mRNA (cDNA clone IMAGE:40006561), partial cds P
BC001179.1 Homo sapiens high density lipoprotein binding protein, mRNA (cDNA clone MGC:2301 IMAGE:3528704), complete cds PA
BC014305.2 Homo sapiens high density lipoprotein binding protein, mRNA (cDNA clone IMAGE:4099438), partial cds PA
AK309075.1 Homo sapiens cDNA, FLJ99116 P
AK312335.1 Homo sapiens cDNA, FLJ92652, highly similar to Homo sapiens high density lipoprotein binding protein (vigilin)(HDLBP), mRNA P
AK300312.1 Homo sapiens cDNA FLJ56889 complete cds, moderately similar to Vigilin PA
AK296684.1 Homo sapiens cDNA FLJ55700 complete cds, moderately similar to Vigilin PA
BC021817.1 Homo sapiens high density lipoprotein binding protein, mRNA (cDNA clone IMAGE:4915167), with apparent retained intron A
BC009422.1 Homo sapiens cDNA clone IMAGE:3613536, partial cds A
BC007961.2 Homo sapiens cDNA clone IMAGE:4301560, containing frame-shift errors PA
AF116718.1 Homo sapiens PRO2900 mRNA, complete cds A
BC038965.1 Homo sapiens high density lipoprotein binding protein (vigilin), mRNA (cDNA clone IMAGE:3920936) A

EST sequences (10 of 4018) [Show all sequences]

AA960756.1 Clone IMAGE:1552166 uncharacterized tissue 3' read P
AA960920.1 Clone IMAGE:1569682 lung 3' read
AA863451.1 Clone IMAGE:1469356 uncharacterized tissue 3' read A
AA962744.1 Clone IMAGE:1573386 kidney 3' read A
AA969172.1 Clone IMAGE:1580295 mixed 3' read
AA975311.1 Clone IMAGE:1558890 lung 3' read
AA983575.1 Clone IMAGE:1559211 intestine 3' read
AA984662.1 Clone IMAGE:1630148 brain 3' read
AA989491.1 Clone IMAGE:1606249 kidney 3' read P
AA991318.1 Clone IMAGE:1606984 mammary gland 3' read P


Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria

 
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