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Finding cDNAs
UGID:3321614     UniGene Hs.709407     Homo sapiens (human)   H3F3A Order cDNA clone, Links
H3 histone, family 3A (H3F3A)
SELECTED PROTEIN SIMILARITIES
Comparison of sequences in UniGene with selected protein reference sequences. The alignments can suggest function of a gene.
Reference ProteinSpeciesId(%)Len(aa)
XP_001718855.1 PREDICTED: similar to histone H. sapiens 100.0 159
XP_001474439.1 PREDICTED: hypothetical protein M. musculus 100.0 135
NP_446437.1 H3 histone, family 3B R. norvegicus 100.0 135
XP_001368225.1 PREDICTED: hypothetical protein M. domestica 100.0 135
XP_001623766.1 predicted protein N. vectensis 100.0 135
NP_509344.1 HIStone family member (his-71) C. elegans 100.0 135
XP_001949594.1 PREDICTED: similar to Histone H3.3B CG8989-PA A. pisum 100.0 135
XP_975889.1 PREDICTED: similar to Histone H3.3B CG8989-PA isoform 2 T. castaneum 100.0 135
NP_001091756.1 h3 histone family 3a B. mori 100.0 135
XP_001657554.1 histone H3.3 A. aegypti 100.0 135
XP_321242.1 AGAP001813-PA A. gambiae 100.0 135
XP_001867328.1 histone H3.3 type 2 C. quinquefasciatus 100.0 135
NP_511095.1 Histone H3.3B CG8989-PA, isoform A D. melanogaster 100.0 135
XP_001120696.1 PREDICTED: similar to H3 histone, family 3B A. mellifera 100.0 135
XP_002119783.1 PREDICTED: similar to Histone H3.3B CG8989-PA C. intestinalis 100.0 135
NP_956297.1 H3 histone, family 3C D. rerio 100.0 135
NP_001080065.1 H3 histone, family 3B (H3.3B) X. laevis 100.0 135
NP_989026.1 H3 histone, family 3B (H3.3B) X. tropicalis 100.0 135
NP_990627.1 H3 histone, family 3B (H3.3B) G. gallus 100.0 135
XP_001514538.1 PREDICTED: hypothetical protein O. anatinus 100.0 135
XP_001091581.1 PREDICTED: similar to H3 histone, family 3B isoform 1 M. mulatta 100.0 135
XP_001140055.1 PREDICTED: hypothetical protein isoform 5 P. troglodytes 100.0 135
XP_537232.1 PREDICTED: similar to H3 histone, family 3B isoform 1 C. lupus familiaris 100.0 135
XP_001495110.1 PREDICTED: similar to Histone H3.3B CG8989-PA isoform 1 E. caballus 100.0 135
NP_999095.1 histone H3.3A S. scrofa 100.0 135
NP_001014411.1 H3 histone, family 3A B. taurus 100.0 135
NP_189372.1 histone H3 A. thaliana 96.3 135
XP_001690671.1 histone H3 C. reinhardtii 95.6 134
NP_009564.1 One of two identical histone H3 proteins (see also HHT2); core histone required for chromatin assembly, involved in heterochromatin-mediated telomeric and HM silencing; regulated by acetylation, methylation, and mitotic phosphorylation; Hht1p S. cerevisiae 94.8 135
XP_328074.1 HISTONE H3 N. crassa 94.8 135

GENE EXPRESSION
Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.
Expression Profile: View expression levels using UniGene's EST ProfileViewer
[Show more entries with profiles like this]
cDNA Sources: pancreas; blood; uterus; eye; embryonic tissue; lung; brain; mixed; uncharacterized tissue; bone; placenta; liver; cervix; vascular; heart; thymus; testis; pituitary gland; muscle; lymph node; ear; tonsil; thyroid; ascites; ovary; adrenal gland; skin; stomach; prostate; intestine; kidney; lymph; bone marrow; mouth; spleen; connective tissue; mammary gland; parathyroid; bladder
MAPPING POSITION
Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.
Chromosome: 2
Map position: 1q41
UniSTS entry: Chr X WI-6046
SEQUENCES
Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (15)

BC066901.1 Homo sapiens H3 histone, family 3A, mRNA (cDNA clone MGC:87038 IMAGE:4826805), complete cds PA
BC067757.1 Homo sapiens H3 histone, family 3A, mRNA (cDNA clone MGC:87039 IMAGE:5294551), complete cds PA
CR625697.1 full-length cDNA clone CS0DE006YI16 of Placenta of Homo sapiens (human) PA
CR616667.1 full-length cDNA clone CS0DF036YP01 of Fetal brain of Homo sapiens (human) PA
CR616566.1 full-length cDNA clone CS0DI053YG15 of Placenta Cot 25-normalized of Homo sapiens (human) PA
CR609641.1 full-length cDNA clone CS0DE011YM19 of Placenta of Homo sapiens (human) PA
CR607635.1 full-length cDNA clone CS0DJ005YO22 of T cells (Jurkat cell line) Cot 10-normalized of Homo sapiens (human) P
CR600004.1 full-length cDNA clone CS0DL002YJ19 of B cells (Ramos cell line) Cot 25-normalized of Homo sapiens (human) PA
CR594323.1 full-length cDNA clone CS0DJ015YD10 of T cells (Jurkat cell line) Cot 10-normalized of Homo sapiens (human) PA
BC081561.1 Homo sapiens H3 histone, family 3A, mRNA (cDNA clone MGC:87783 IMAGE:5162817), complete cds PA
BC081560.1 Homo sapiens H3 histone, family 3A, mRNA (cDNA clone MGC:87782 IMAGE:3884607), complete cds PA
BC095447.1 Homo sapiens H3 histone, family 3A, mRNA (cDNA clone MGC:111189 IMAGE:30718542), complete cds PA
BC029405.1 Homo sapiens H3 histone, family 3A, mRNA (cDNA clone MGC:32638 IMAGE:4077662), complete cds PA
BC013857.1 Homo sapiens H3 histone, family 3A, mRNA (cDNA clone IMAGE:4519354) PA
BC038989.1 Homo sapiens H3 histone, family 3A, mRNA (cDNA clone MGC:47761 IMAGE:6014954), complete cds PA

EST sequences (10 of 333) [Show all sequences]

AA995531.1 Clone IMAGE:1606639 kidney 3' read A
AI051158.1 Clone IMAGE:1669913 brain 3' read A
AI131060.1 Clone IMAGE:1706244 heart 3' read PA
AI141653.1 Clone IMAGE:1614218 uncharacterized tissue 3' read PA
AI190637.1 Clone IMAGE:1731792 heart 3' read PA
AI191612.1 Clone IMAGE:1734039 testis 3' read PA
AI205876.1 Clone IMAGE:1756460 lung 3' read PA
CB111534.1 Clone L5HLK1-19-F06 liver 5' read PA
CB137470.1 Clone L5HLK1-29-B04 liver 5' read PA
CB112821.1 Clone L6ChoCK0-7-H08 liver 5' read PA


Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria

 
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