Transcribed locus, strongly similar to NP_001002079.1 ribosomal protein S13 [Danio rerio], Homo sapiens

Expression Profile:

View expression levels using UniGene's EST ProfileViewer
[Show more entries with profiles like this]

Highly represented in several libraries

GEO profiles:

Gene expression profiles in the NCBI Gene Expression Omnibus database

cDNA Sources:

embryonic tissue; prostate; mixed; brain; muscle; bone marrow; uncharacterized tissue; mammary gland; liver; intestine; skin; blood; lung; ascites; testis; placenta; connective tissue; vascular; heart; eye; pancreas; lymph; uterus; pharynx; thymus; kidney; salivary gland; cervix; tonsil; stomach; ovary; thyroid; nerve; umbilical cord; bone; lymph node; ear; mouth; bladder; adrenal gland; spleen; adipose tissue; pineal gland; pituitary gland; parathyroid

NCBI

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Finding cDNAs

UGID:2139785 UniGene Hs.632891 Homo sapiens (human)

Links

Transcribed locus, strongly similar to NP_001002079.1 ribosomal protein S13 [Danio rerio]

SELECTED PROTEIN SIMILARITIES

Comparison of sequences in UniGene with selected protein reference sequences. The alignments can suggest function of a gene.

Reference Protein		Species	Id(%)	Len(aa)
NP_080809.1	ribosomal protein S13	M. musculus	100.0	150
XP_001053043.1	PREDICTED: similar to ribosomal protein S13	R. norvegicus	100.0	150
NP_001016602.1	ribosomal protein S13	X. tropicalis	100.0	150
NP_001001783.1	ribosomal protein S13	G. gallus	100.0	150
XP_001510702.1	PREDICTED: hypothetical protein	O. anatinus	100.0	150
XP_001086088.1	PREDICTED: similar to ribosomal protein S13	M. mulatta	100.0	150
XP_508306.1	PREDICTED: hypothetical protein	P. troglodytes	100.0	150
NP_001008.1	ribosomal protein S13	H. sapiens	100.0	150
XP_852037.1	PREDICTED: similar to ribosomal protein S13 isoform 1	C. lupus familiaris	100.0	150
XP_001504999.1	PREDICTED: similar to ribosomal protein S13	E. caballus	100.0	150
NP_001020513.1	ribosomal protein S13	B. taurus	100.0	150
NP_001002079.1	ribosomal protein S13	D. rerio	99.3	150
NP_001080351.1	ribosomal protein S13	X. laevis	98.7	150
XP_330225.1	hypothetical protein	N. crassa	91.4	150
NP_476938.1	Ribosomal protein S13 CG13389-PA, isoform A	D. melanogaster	90.7	150
NP_010349.1	Protein component of the small (40S) ribosomal subunit; has similarity to E. coli S15 and rat S13 ribosomal proteins; Rps13p	S. cerevisiae	86.8	150
NP_567151.1	ATRPS13A (RIBOSOMAL PROTEIN S13A); structural constituent of ribosome	A. thaliana	85.4	150
NP_498393.1	Ribosomal Protein, Small subunit family member (rps-13)	C. elegans	82.1	150
XP_001690424.1	ribosomal protein S13, component of cytosolic 80S ribosome and 40S small subunit	C. reinhardtii	80.1	150

GENE EXPRESSION

Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.

MAPPING POSITION

Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.

Chromosome:	1
UniSTS entry:	Chr 2	D19S1001
UniSTS entry:	Chr 2	GDB:372023
UniSTS entry:	Chr 15	D11S4397

SEQUENCES

Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

EST sequences (10 of 914) [Show all sequences]

AA976123.1	Clone IMAGE:1558472	lung	3' read	P
AA985553.1	Clone IMAGE:1601181	lung	3' read	P
R24700.1	Clone IMAGE:131953	placenta	5' read	P
AI268735.1	Clone IMAGE:1910998	lung	3' read	P
CB105347.1	Clone L1HLK1-3-D09	liver	5' read	P
CB106971.1	Clone L3SNU475-9-D11	liver	5' read	P
CB107361.1	Clone L3SNU475-21-A10	liver	5' read	P
CB117112.1	Clone L4SNU368-28-C05	liver	5' read	P
CB133449.1	Clone L4SNU368s1-12-C01	liver	5' read	P
CB133612.1	Clone L4SNU368s1-14-D09	liver	5' read	P

Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria