NCBI UniGene banner graphic
PubMed Nucleotide Protein Genome Structure Popset Taxonomy
 Search
NCBI

UniGene
Homepage
FAQs
Query Tips
Library Browser
DDD
Download UniGene

Related Databases
Gene
HomoloGene
dbEST
Trace Archive

NIH cDNA Projects
MGC | ZGC | XGC
Finding cDNAs

UGID:1625792     UniGene Mm.379094     Mus musculus (mouse)   Rpl36
Ribosomal protein L36, mRNA (cDNA clone MGC:35943 IMAGE:5100307) (Rpl36)
SELECTED PROTEIN SIMILARITIES
Comparison of sequences in UniGene with selected protein reference sequences. The alignments can suggest function of a gene.
Reference ProteinSpeciesId(%)Len(aa)
XP_001480771.1 PREDICTED: similar to rat ribosomal protein L36 M. musculus 100.0 104
NP_071949.1 ribosomal protein L36 R. norvegicus 100.0 104
XP_001365845.1 PREDICTED: similar to 60S ribosomal protein L36 M. domestica 100.0 104
NP_989471.1 ribosomal protein L36 G. gallus 100.0 104
NP_056229.2 ribosomal protein L36 H. sapiens 100.0 104
NP_001071607.1 ribosomal protein L36 B. taurus 100.0 104
NP_001087323.1 MGC85430 protein X. laevis 98.1 104
NP_998117.1 ribosomal protein L36 D. rerio 96.2 104
NP_476629.1 ribosomal protein L36, isoform A D. melanogaster 73.6 110
XP_001703188.1 ribosomal protein L36, component of cytosolic 80S ribosome and 60S large subunit C. reinhardtii 67.3 97
NP_498573.2 Ribosomal Protein, Large subunit family member (rpl-36) C. elegans 65.3 101
XP_330738.1 hypothetical protein N. crassa 63.0 100
NP_195865.1 60S ribosomal protein L36 (RPL36C) A. thaliana 62.0 107
NP_015074.1 Protein component of the large (60S) ribosomal subunit, nearly identical to Rpl36Ap and has similarity to rat L36 ribosomal protein; binds to 5.8 S rRNA; Rpl36bp S. cerevisiae 48.5 99

GENE EXPRESSION
Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.
EST Profile: Approximate expression patterns inferred from EST sources.
[Show more entries with profiles like this]
GEO profiles: Experimental gene expression data (Gene Expression Omnibus).
cDNA Sources: embryonic tissue; pancreas; mammary gland; intestine; testis; spleen; mixed; liver; kidney; uncharacterized tissue; brain; prostate; stomach; eye; thymus; inner ear; extraembryonic tissue; ovary; lymph node; heart; lung; bone; blood; muscle; tongue; adipose tissue; spinal cord
MAPPING POSITION
Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.
Chromosome: 6
Map position: 17 D
UniSTS entry: Chr 12 (n/a)
SEQUENCES
Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (2)

X75895.1 M.musculus mRNA for ribosomal protein L36 PA
BC021595.1 Mus musculus ribosomal protein L36, mRNA (cDNA clone MGC:35943 IMAGE:5100307), complete cds PA

Model sequences (1)

XM_001480721.1 PREDICTED: Mus musculus similar to rat ribosomal protein L36 (LOC100043718), mRNA PA

EST sequences (10 of 374) [Show all sequences]

BY052034.1 Clone I730068A15 spleen 5' read P
BY058523.1 Clone I730096P16 spleen 5' read P
BY067716.1 Clone I920056C23 kidney 5' read P
BY082122.1 Clone K630036L05 embryonic tissue 5' read P
BY088239.1 Clone K630069N03 embryonic tissue 5' read P
BY091002.1 Clone K630084B15 embryonic tissue 5' read P
BY111884.1 Clone L330050C16 embryonic tissue 5' read P
BY147938.1 Clone L930241H18 embryonic tissue 5' read P
BY148986.1 Clone L930256I04 embryonic tissue 5' read P
BY397845.1 Clone I730016F24 thymus 3' read PA


Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria

 
NLM | NIH | UniGene | Privacy Statement | Disclaimer | NCBI Help