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Finding cDNAs
UGID:1097911     UniGene Mm.298875     Mus musculus (mouse)   Clta Order cDNA clone, Links
Clathrin, light polypeptide (Lca) (Clta)
SELECTED PROTEIN SIMILARITIES
Comparison of sequences in UniGene with selected protein reference sequences. The alignments can suggest function of a gene.
Reference ProteinSpeciesId(%)Len(aa)
NP_009027.1 clathrin, light polypeptide A isoform b H. sapiens 99.6 247

GENE EXPRESSION
Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.
Expression Profile: View expression levels using UniGene's EST ProfileViewer
[Show more entries with profiles like this]
GEO profiles: Gene expression profiles in the NCBI Gene Expression Omnibus database
cDNA Sources: embryonic tissue; mammary gland; brain; mixed; lung; extraembryonic tissue; joint; intestine; eye; kidney; thyroid; bone marrow; liver; molar; pancreas; testis; lymph node; heart; muscle; thymus; spleen; blood; connective tissue; pituitary gland; uncharacterized tissue; skin; fertilized ovum; tongue; pineal gland; spinal cord; ovary; bone; salivary gland; inner ear; prostate; dorsal root ganglion; sympathetic ganglion
MAPPING POSITION
Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.
Chromosome: 4
SEQUENCES
Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (19)

AK035903.1 Mus musculus 16 days neonate cerebellum cDNA, RIKEN full-length enriched library, clone:9630016K07 product:unclassifiable, full insert sequence
BC057660.1 Mus musculus clathrin, light polypeptide (Lca), mRNA (cDNA clone MGC:68133 IMAGE:3154277), complete cds PA
AK216692.1 Mus musculus cDNA, clone:Y2G0139D08, strand:minus, reference:ENSEMBL:Mouse-Transcript-ENST:ENSMUST00000069517, based on BLAT search P
AK214893.1 Mus musculus cDNA, clone:Y2G0133F05, strand:minus, reference:ENSEMBL:Mouse-Transcript-ENST:ENSMUST00000069517, based on BLAT search A
AK209982.1 Mus musculus cDNA, clone:Y2G0116P09, strand:minus, reference:ENSEMBL:Mouse-Transcript-ENST:ENSMUST00000069517, based on BLAT search
AK209788.1 Mus musculus cDNA, clone:Y2G0116E02, strand:minus, reference:ENSEMBL:Mouse-Transcript-ENST:ENSMUST00000069517, based on BLAT search
AK207565.1 Mus musculus cDNA, clone:Y2G0108G17, strand:minus, reference:ENSEMBL:Mouse-Transcript-ENST:ENSMUST00000069517, based on BLAT search
AK207054.1 Mus musculus cDNA, clone:Y2G0106M11, strand:minus, reference:ENSEMBL:Mouse-Transcript-ENST:ENSMUST00000069517, based on BLAT search
AK205683.1 Mus musculus cDNA, clone:Y2G0102H10, strand:plus, reference:ENSEMBL:Mouse-Transcript-ENST:ENSMUST00000069517, based on BLAT search
AK152397.1 Mus musculus bone marrow macrophage cDNA, RIKEN full-length enriched library, clone:I830067P10 product:clathrin, light polypeptide (Lca), full insert sequence P
AK150148.1 Mus musculus bone marrow macrophage cDNA, RIKEN full-length enriched library, clone:G530137G05 product:clathrin, light polypeptide (Lca), full insert sequence P
AK149761.1 Mus musculus bone marrow macrophage cDNA, RIKEN full-length enriched library, clone:G530015G11 product:clathrin, light polypeptide (Lca), full insert sequence P
AK168130.1 Mus musculus CRL-1722 L5178Y-R cDNA, RIKEN full-length enriched library, clone:I730059L06 product:clathrin, light polypeptide (Lca), full insert sequence P
AK146965.1 Mus musculus 13 days embryo liver cDNA, RIKEN full-length enriched library, clone:I920080G06 product:clathrin, light polypeptide (Lca), full insert sequence P
NM_001080386.1 Mus musculus clathrin, light polypeptide (Lca) (Clta), transcript variant 4, mRNA A
NM_001080385.1 Mus musculus clathrin, light polypeptide (Lca) (Clta), transcript variant 2, mRNA A
NM_001080384.1 Mus musculus clathrin, light polypeptide (Lca) (Clta), transcript variant 1, mRNA A
U91848.1 Mus musculus clathrin light chain 2 mRNA, complete cds P
NM_016760.2 Mus musculus clathrin, light polypeptide (Lca) (Clta), transcript variant 3, mRNA A

EST sequences (10 of 651) [Show all sequences]

BY000970.1 Clone 1210002C04 lung 5' read
BY005176.1 Clone F420001N12 spleen 5' read P
BY008110.1 Clone G4D0009K12 kidney 5' read P
BY008242.1 Clone G630006M19 spinal cord 5' read
BY030490.1 Clone I0C0012C10 embryonic tissue 5' read
BY030575.1 Clone I0C0013B16 embryonic tissue 5' read
BY030662.1 Clone I0C0014D16 embryonic tissue 5' read
BY030710.1 Clone I0C0014N07 embryonic tissue 5' read
BY034368.1 Clone I530011L02 extraembryonic tissue 5' read P
BY038983.1 Clone I730009G14 spleen 5' read P


Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria

 
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