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UGID:1128596     UniGene Mm.329560     Mus musculus (mouse)   Nfatc1 Order cDNA clone, Links
Nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 1 (Nfatc1)
SELECTED PROTEIN SIMILARITIES
Comparison of sequences in UniGene with selected protein reference sequences. The alignments can suggest function of a gene.
Reference ProteinSpeciesId(%)Len(aa)
NP_765977.1 nuclear factor of activated T-cells, cytosolic component 1 isoform E H. sapiens 92.0 811
NP_001032255.1 nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 2 isoform c M. musculus 70.6 394

GENE EXPRESSION
Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.
Expression Profile: View expression levels using UniGene's EST ProfileViewer
[Show more entries with profiles like this]
GEO profiles: Gene expression profiles in the NCBI Gene Expression Omnibus database
cDNA Sources: thymus; embryonic tissue; lymph node; heart; spleen; lung; brain; bone marrow; mammary gland; mixed; ovary; skin; joint; pancreas; uncharacterized tissue; stomach; inner ear; blood; spinal cord; testis; bladder; bone; vagina; thyroid; eye; oviduct; intestine; liver
MAPPING POSITION
Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.
Chromosome: 18
Map position: 18 E4|18 54.0 cM
SEQUENCES
Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (16)

AK048610.1 Mus musculus 16 days embryo head cDNA, RIKEN full-length enriched library, clone:C130087D15 product:NUCLEAR FACTOR OF ACTIVATED T-CELLS, CYTOPLASMIC 1 (NFAT TRANSCRIPTION COMPLEX CYTOSOLIC COMPONENT) (NF-ATC1) (NF-ATC), full insert sequence P
BC061509.1 Mus musculus nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 1, mRNA (cDNA clone MGC:70313 IMAGE:5354603), complete cds PA
NM_198429.1 Mus musculus nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 1 (Nfatc1), transcript variant 2, mRNA PA
AK144965.1 Mus musculus mammary gland RCB-0526 Jyg-MC(A) cDNA, RIKEN full-length enriched library, clone:G830016A21 product:nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 1, full insert sequence P
EU887572.1 Mus musculus nuclear factor of activated T-cells c1 isoform IB-IXL (Nfatc1) mRNA, complete cds, alternatively spliced A
EU887571.1 Mus musculus nuclear factor of activated T-cells c1 isoform IB-VIII (Nfatc1) mRNA, complete cds, alternatively spliced A
EU887570.1 Mus musculus nuclear factor of activated T-cells c1 isoform IA-VIII (Nfatc1) mRNA, complete cds, alternatively spliced A
EU887569.1 Mus musculus nuclear factor of activated T-cells c1 isoform IB-IXS (Nfatc1) mRNA, complete cds, alternatively spliced A
EU887568.1 Mus musculus nuclear factor of activated T-cells c1 isoform IA-IXS (Nfatc1) mRNA, complete cds, alternatively spliced A
EU887567.1 Mus musculus nuclear factor of activated T-cells c1 isoform IA-IXL (Nfatc1) mRNA, complete cds, alternatively spliced A
AF049606.1 Mus musculus transcription factor NF-ATc isoform b (Nfatcb) mRNA, complete cds P
AF087434.1 Mus musculus transcription factor NF-ATc isoform a (NF-ATca) mRNA, complete cds P
AF239169.1 Mus musculus nuclear factor of activated T cells c (Nfatc1) mRNA, complete cds PA
NM_016791.3 Mus musculus nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 1 (Nfatc1), transcript variant 1, mRNA
AK008747.1 Mus musculus adult male stomach cDNA, RIKEN full-length enriched library, clone:2210017P03 product:unclassifiable, full insert sequence
AK004810.1 Mus musculus adult male lung cDNA, RIKEN full-length enriched library, clone:1200016E19 product:nuclear factor of activated T-cells, cytoplasmic 1, full insert sequence P

EST sequences (10 of 164) [Show all sequences]

CA576780.1 Clone NIA:K0700B02_IMAGE:30073549 bone marrow 5' read
CA578604.1 Clone NIA:K0726C02_IMAGE:30076057 bone marrow 5' read P
BY010689.1 Clone G730021K18 lung 5' read
BY010815.1 Clone G730022H07 lung 5' read P
BY012891.1 Clone G730035I08 lung 5' read P
BY233929.1 Clone F930032M20 inner ear 5' read P
BY236791.1 Clone F930049L10 inner ear 5' read P
BY343947.1 Clone L730001D12 joint 5' read
BY344399.1 Clone L730004I18 joint 5' read P
BY344638.1 Clone L730006F19 joint 5' read P


Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria

 
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