NbLib0053: NIDCD mouse organ of corti unnormalized (gi)
Last GRIST date: 03/20/2008
Related Publication: Gene expression profile of the mouse organ of Corti at the onset of hearing. Pompeia C, Hurle B, Belyantseva IA, Noben-Trauth K, Beisel K, Gao J, Buchoff P, Wistow G, Kachar B. Genomics. 2004. Jun;83(6):1000-11. View Publication
EST analysis of gene expression in the mouse organ of Corti at the onset of hearing
In order to study the transcriptional repertoire of the organ of Corti during the onset of hearing, a database of expressed sequence tags (EST) is being generated from in depth sequencing of a non-amplified mouse organ of Corti cDNA library. Inserts of cDNA clones were sequenced, analyzed and clustered using specially written software (NEIBank, http://neibank.nei.nih.gov). A preliminary collection of ESTs with description and human chromosomal location is presented as a web-based resource for public access. A paper with detailed description of the library and detailed analysis of the repertoire of genes expressed will soon be made available (Kachar et al., in preparation).
View Organ of Corti library comparison table: UniGene identifiers were used to compare the OC library with several other quantitative libraries. The values express the frequency of gene expression. Reference UniGene library identifiers are shown preceding the tissue from which the library was made.
| Group# | Description |
Entrez Gene Id | GenBank | UniGene (Build Mm #175) |
Chromosomal Pos. (BLAT) | Chromosome (UniGene) | Num. Clones |
|---|
| 6801 | Unidentified gi52a03
| |
|
|
|
|
1 |
| 6802 | Unidentified gi52a02
| |
|
|
|
|
1 |
| 6803 | Unidentified gi51h10
| |
|
|
|
|
1 |
| 6804 | Unidentified gi51c09
| |
|
|
|
|
1 |
| 6805 | Unidentified gi51c02
| |
|
|
|
|
1 |
| 6806 | Unidentified gi51b05
| |
|
|
|
|
1 |
| 6807 | Unidentified gi51b04
| |
|
|
|
|
1 |
| 6808 | Unidentified gi51b02
| |
|
|
|
|
1 |
| 6809 | Unidentified gi51a03
| |
|
|
|
|
1 |
| 6810 | Unidentified gi50f02
| |
|
|
|
|
1 |
| 6811 | Unidentified gi50e09
| |
|
|
|
|
1 |
| 6812 | Unidentified gi49e10
| |
|
|
|
|
1 |
| 6813 | Unidentified gi49e09
| |
|
|
|
|
1 |
| 6814 | Unidentified gi49d12
| |
|
|
|
|
1 |
| 6815 | 86% protein similarity to: Chain L, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant, Aldh22, Apo Form
| |
|
|
|
|
1 |
| 6816 | Unidentified gi49b03
| |
|
|
|
|
1 |
| 6817 | Unidentified gi49b01
| |
|
|
|
|
1 |
| 6818 | Unidentified gi49a03
| |
|
|
|
|
1 |
| 6819 | Unidentified gi48g08
| |
|
|
|
|
1 |
| 6820 | Unidentified gi48f07
| |
|
|
|
|
1 |
| 6821 | 44% protein similarity to: Sp4 transcription factor [Rattus norvegicus]
| |
|
|
|
|
1 |
| 6822 | Unidentified gi48e09
| |
|
|
|
|
1 |
| 6823 | 87% protein similarity to: MoKA [Mus musculus]
| |
|
|
|
|
1 |
| 6824 | Unidentified gi48a09
| |
|
|
|
|
1 |
| 6825 | Unidentified gi48a01
| |
|
|
|
|
1 |
| 6826 | Unidentified gi47h10
| |
|
|
|
|
1 |
| 6827 | Unidentified gi47h04
| |
|
|
|
|
1 |
| 6828 | Unidentified gi47f09
| |
|
|
|
|
1 |
| 6829 | Unidentified gi47f05
| |
|
|
|
|
1 |
| 6830 | Unidentified gi47e10
| |
|
|
|
|
1 |
| 6831 | Unidentified gi47b04
| |
|
|
|
|
1 |
| 6832 | Unidentified gi46g10
| |
|
|
|
|
1 |
| 6833 | 90% protein similarity to: 40S ribosomal protein S28 [Sus scrofa]
| |
|
|
|
|
1 |
| 6834 | Unidentified gi46e07
| |
|
|
|
|
1 |
| 6835 | Unidentified gi46e02
| |
|
|
|
|
1 |
| 6836 | Unidentified gi46e01
| |
|
|
|
|
1 |
| 6837 | Unidentified gi46d11
| |
|
|
|
|
1 |
| 6838 | Unidentified gi46d04
| |
|
|
|
|
1 |
| 6839 | Unidentified gi46c12
| |
|
|
|
|
1 |
| 6840 | Unidentified gi46c08
| |
|
|
|
|
1 |
| 6841 | Unidentified gi46c06
| |
|
|
|
|
1 |
| 6842 | Unidentified gi46b09
| |
|
|
|
|
1 |
| 6843 | Unidentified gi46b08
| |
|
|
|
|
1 |
| 6844 | Unidentified gi46a09
| |
|
|
|
|
1 |
| 6845 | Unidentified gi46a05
| |
|
|
|
|
1 |
| 6846 | Unidentified gi45e12
| |
|
|
|
|
1 |
| 6847 | Unidentified gi45d02
| |
|
|
|
|
1 |
| 6848 | Unidentified gi45c02
| |
|
|
|
|
1 |
| 6849 | Unidentified gi45b03
| |
|
|
|
|
1 |
| 6850 | Unidentified gi44f12
| |
|
|
|
|
1 |
| 6851 | Unidentified gi44f10
| |
|
|
|
|
1 |
| 6852 | Unidentified gi44f05
| |
|
|
|
|
1 |
| 6853 | Unidentified gi44d05
| |
|
|
|
|
1 |
| 6854 | Unidentified gi44c11
| |
|
|
|
|
1 |
| 6855 | 83% protein similarity to: Bri3 protein [Mus musculus]
| |
|
|
|
|
1 |
| 6856 | Unidentified gi44a08
| |
|
|
|
|
1 |
| 6857 | Unidentified gi43h01
| |
|
|
|
|
1 |
| 6858 | 42% protein similarity to: hydroxyproline-rich glycoprotein DZ-HRGP-like [Oryza sativa (japonica cultivar-group)]
| |
|
|
|
|
1 |
| 6859 | Unidentified gi43f10
| |
|
|
|
|
1 |
| 6860 | Unidentified gi43a09
| |
|
|
|
|
1 |
| 6861 | Unidentified gi42h11
| |
|
|
|
|
1 |
| 6862 | 69% protein similarity to: Capping protein (actin filament) muscle Z-line, alpha 1 [Mus musculus]
| |
|
|
|
|
1 |
| 6863 | Unidentified gi42g09
| |
|
|
|
|
1 |
| 6864 | Unidentified gi42e09
| |
|
|
|
|
1 |
| 6865 | Unidentified gi36f09
| |
|
|
|
|
1 |
| 6866 | Unidentified gi36e09
| |
|
|
|
|
1 |
| 6867 | Unidentified gi36e06
| |
|
|
|
|
1 |
| 6868 | Unidentified gi36e05
| |
|
|
|
|
1 |
| 6869 | 100% protein similarity to: TCDD-inducible poly(ADP-ribose) polymerase [Mus musculus]
| |
|
|
|
|
1 |
| 6870 | Unidentified gi36d09
| |
|
|
|
|
1 |
| 6871 | Unidentified gi36d02
| |
|
|
|
|
1 |
| 6872 | Unidentified gi36b09
| |
|
|
|
|
1 |
| 6873 | Unidentified gi36b05
| |
|
|
|
|
1 |
| 6874 | Unidentified gi35h08
| |
|
|
|
|
1 |
| 6875 | Unidentified gi35f04
| |
|
|
|
|
1 |
| 6876 | Unidentified gi35e12
| |
|
|
|
|
1 |
| 6877 | Unidentified gi35d10
| |
|
|
|
|
1 |
| 6878 | Unidentified gi35c11
| |
|
|
|
|
1 |
| 6879 | Unidentified gi35b12
| |
|
|
|
|
1 |
| 6880 | Unidentified gi35b08
| |
|
|
|
|
1 |
| 6881 | Unidentified gi35a07
| |
|
|
|
|
1 |
| 6882 | Unidentified gi35a04
| |
|
|
|
|
1 |
| 6883 | Unidentified gi34h02
| |
|
|
|
|
1 |
| 6884 | Unidentified gi34f10
| |
|
|
|
|
1 |
| 6885 | Unidentified gi34f06
| |
|
|
|
|
1 |
| 6886 | Unidentified gi34e12
| |
|
|
|
|
1 |
| 6887 | Unidentified gi34e10
| |
|
|
|
|
1 |
| 6888 | Unidentified gi34e03
| |
|
|
|
|
1 |
| 6889 | Unidentified gi34d12
| |
|
|
|
|
1 |
| 6890 | Unidentified gi34d11
| |
|
|
|
|
1 |
| 6891 | Unidentified gi34d02
| |
|
|
|
|
1 |
| 6892 | Unidentified gi34c07
| |
|
|
|
|
1 |
| 6893 | 100% protein similarity to: ribosomal protein S15 [synthetic construct]
| |
|
|
|
|
1 |
| 6894 | Unidentified gi33h11
| |
|
|
|
|
1 |
| 6895 | Unidentified gi33g08
| |
|
|
|
|
1 |
| 6896 | Unidentified gi33g05
| |
|
|
|
|
1 |
| 6897 | Unidentified gi33e12
| |
|
|
|
|
1 |
| 6898 | Unidentified gi33e10
| |
|
|
|
|
1 |
| 6899 | Unidentified gi33e08
| |
|
|
|
|
1 |
| 6900 | Unidentified gi33d12
| |
|
|
|
|
1 |
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