NbLib0053: NIDCD mouse organ of corti unnormalized (gi)
Last GRIST date: 03/20/2008
Related Publication: Gene expression profile of the mouse organ of Corti at the onset of hearing. Pompeia C, Hurle B, Belyantseva IA, Noben-Trauth K, Beisel K, Gao J, Buchoff P, Wistow G, Kachar B. Genomics. 2004. Jun;83(6):1000-11. View Publication
EST analysis of gene expression in the mouse organ of Corti at the onset of hearing
In order to study the transcriptional repertoire of the organ of Corti during the onset of hearing, a database of expressed sequence tags (EST) is being generated from in depth sequencing of a non-amplified mouse organ of Corti cDNA library. Inserts of cDNA clones were sequenced, analyzed and clustered using specially written software (NEIBank, http://neibank.nei.nih.gov). A preliminary collection of ESTs with description and human chromosomal location is presented as a web-based resource for public access. A paper with detailed description of the library and detailed analysis of the repertoire of genes expressed will soon be made available (Kachar et al., in preparation).
View Organ of Corti library comparison table: UniGene identifiers were used to compare the OC library with several other quantitative libraries. The values express the frequency of gene expression. Reference UniGene library identifiers are shown preceding the tissue from which the library was made.
| Group# | Description |
Entrez Gene Id | GenBank | UniGene (Build Mm #175) |
Chromosomal Pos. (BLAT) | Chromosome (UniGene) | Num. Clones |
|---|
| 8101 | Unidentified gi28h10
| |
|
|
|
|
1 |
| 8102 | Unidentified gi28f03
| |
|
|
|
|
1 |
| 8103 | Unidentified gi28d11
| |
|
|
|
|
1 |
| 8104 | 71% protein similarity to: lung cancer oncogene 7 [Homo sapiens]
| |
|
|
|
|
1 |
| 8105 | Unidentified gi28b02
| |
|
|
|
|
1 |
| 8106 | Unidentified gi28b01
| |
|
|
|
|
1 |
| 8107 | Unidentified gi27h06
| |
|
|
|
|
1 |
| 8108 | Unidentified gi27g08
| |
|
|
|
|
1 |
| 8109 | Unidentified gi27g07
| |
|
|
|
|
1 |
| 8110 | Unidentified gi27e04
| |
|
|
|
|
1 |
| 8111 | Unidentified gi27d06
| |
|
|
|
|
1 |
| 8112 | Unidentified gi27d03
| |
|
|
|
|
1 |
| 8113 | Unidentified gi27c06
| |
|
|
|
|
1 |
| 8114 | Unidentified gi27c04
| |
|
|
|
|
1 |
| 8115 | Unidentified gi27b05
| |
|
|
|
|
1 |
| 8116 | Unidentified gi27a04
| |
|
|
|
|
1 |
| 8117 | Unidentified gi26f09
| |
|
|
|
|
1 |
| 8118 | Unidentified gi26d08
| |
|
|
|
|
1 |
| 8119 | Unidentified gi26d01
| |
|
|
|
|
1 |
| 8120 | Unidentified gi26a04
| |
|
|
|
|
1 |
| 8121 | Unidentified gi26a03
| |
|
|
|
|
1 |
| 8122 | Unidentified gi25h05
| |
|
|
|
|
1 |
| 8123 | Unidentified gi25g03
| |
|
|
|
|
1 |
| 8124 | Unidentified gi25f11
| |
|
|
|
|
1 |
| 8125 | Unidentified gi25f03
| |
|
|
|
|
1 |
| 8126 | Unidentified gi25d09
| |
|
|
|
|
1 |
| 8127 | Unidentified gi25c10
| |
|
|
|
|
1 |
| 8128 | Unidentified gi25b07
| |
|
|
|
|
1 |
| 8129 | Unidentified gi25b06
| |
|
|
|
|
1 |
| 8130 | 94% protein similarity to: Krt1-15 protein [Mus musculus]
| |
|
|
|
|
1 |
| 8131 | Unidentified gi24h01
| |
|
|
|
|
1 |
| 8132 | Unidentified gi24g06
| |
|
|
|
|
1 |
| 8133 | Unidentified gi24f05
| |
|
|
|
|
1 |
| 8134 | Unidentified gi24e09
| |
|
|
|
|
1 |
| 8135 | Unidentified gi24e08
| |
|
|
|
|
1 |
| 8136 | Unidentified gi24d11
| |
|
|
|
|
1 |
| 8137 | Unidentified gi24d05
| |
|
|
|
|
1 |
| 8138 | 69% protein similarity to: Dihydrolipoamide dehydrogenase, variant [Homo sapiens]
| |
|
|
|
|
1 |
| 8139 | Unidentified gi24c07
| |
|
|
|
|
1 |
| 8140 | Unidentified gi24b11
| |
|
|
|
|
1 |
| 8141 | Unidentified gi24b09
| |
|
|
|
|
1 |
| 8142 | 78% protein similarity to: tapasin [Mus musculus]
| |
|
|
|
|
1 |
| 8143 | Unidentified gi23h09
| |
|
|
|
|
1 |
| 8144 | Unidentified gi23h07
| |
|
|
|
|
1 |
| 8145 | Unidentified gi23f12
| |
|
|
|
|
1 |
| 8146 | Unidentified gi23e11
| |
|
|
|
|
1 |
| 8147 | 74% protein similarity to: LRRGT00191 [Rattus norvegicus]
| |
|
|
|
|
1 |
| 8148 | Unidentified gi23d07
| |
|
|
|
|
1 |
| 8149 | Unidentified gi23d03
| |
|
|
|
|
1 |
| 8150 | 94% protein similarity to: Kazal-type serine protease inhibitor domain 1 [Mus musculus]
| |
|
|
|
|
1 |
| 8151 | Unidentified gi12c11
| |
|
|
|
|
1 |
| 8152 | Unidentified gi12c04
| |
|
|
|
|
1 |
| 8153 | 90% protein similarity to: unnamed protein product [Mus musculus]
| |
|
|
|
|
1 |
| 8154 | Unidentified gi12b02
| |
|
|
|
|
1 |
| 8155 | Unidentified gi12a09
| |
|
|
|
|
1 |
| 8156 | 84% protein similarity to: Junction plakoglobin [Mus musculus]
| |
|
|
|
|
1 |
| 8157 | Unidentified gi07f01
| |
|
|
|
|
1 |
| 8158 | Unidentified gi07e08
| |
|
|
|
|
1 |
| 8159 | Unidentified gi07e07
| |
|
|
|
|
1 |
| 8160 | Unidentified gi07d04
| |
|
|
|
|
1 |
| 8161 | Unidentified gi07d01
| |
|
|
|
|
1 |
| 8162 | Unidentified gi07c11
| |
|
|
|
|
1 |
| 8163 | Unidentified gi07c07
| |
|
|
|
|
1 |
| 8164 | Unidentified gi07c01
| |
|
|
|
|
1 |
| 8165 | Unidentified gi07b08
| |
|
|
|
|
1 |
| 8166 | Unidentified gi11d11
| |
|
|
|
|
1 |
| 8167 | Unidentified gi11b06
| |
|
|
|
|
1 |
| 8168 | Unidentified gi11b02
| |
|
|
|
|
1 |
| 8169 | Unidentified gi11a04
| |
|
|
|
|
1 |
| 8170 | Unidentified gi10h11
| |
|
|
|
|
1 |
| 8171 | Unidentified gi10e08
| |
|
|
|
|
1 |
| 8172 | Unidentified gi10c01
| |
|
|
|
|
1 |
| 8173 | Unidentified gi10a07
| |
|
|
|
|
1 |
| 8174 | Unidentified gi09g07
| |
|
|
|
|
1 |
| 8175 | Unidentified gi09e06
| |
|
|
|
|
1 |
| 8176 | 84% protein similarity to: unnamed protein product [Mus musculus]
| |
|
|
|
|
1 |
| 8177 | Unidentified gi09c09
| |
|
|
|
|
1 |
| 8178 | Unidentified gi09c05
| |
|
|
|
|
1 |
| 8179 | 60% protein similarity to: pherophorin-dz1 protein [Volvox carteri f. nagariensis]
| |
|
|
|
|
1 |
| 8180 | Unidentified gi08h10
| |
|
|
|
|
1 |
| 8181 | Unidentified gi08b11
| |
|
|
|
|
1 |
| 8182 | Unidentified gi08b10
| |
|
|
|
|
1 |
| 8183 | Unidentified gi07h04
| |
|
|
|
|
1 |
| 8184 | Unidentified gi07f11
| |
|
|
|
|
1 |
| 8185 | Unidentified gi07b02
| |
|
|
|
|
1 |
| 8186 | Unidentified gi06e08
| |
|
|
|
|
1 |
| 8187 | Unidentified gi06c12
| |
|
|
|
|
1 |
| 8188 | Unidentified gi05d11
| |
|
|
|
|
1 |
| 8189 | Unidentified gi05d02
| |
|
|
|
|
1 |
| 8190 | Unidentified gi05c03
| |
|
|
|
|
1 |
| 8191 | Unidentified gi05a06
| |
|
|
|
|
1 |
| 8192 | Unidentified gi04a07
| |
|
|
|
|
1 |
| 8193 | Unidentified gi03h04
| |
|
|
|
|
1 |
| 8194 | Unidentified gi03g03
| |
|
|
|
|
1 |
| 8195 | Unidentified gi03f05
| |
|
|
|
|
1 |
| 8196 | Unidentified gi03c08
| |
|
|
|
|
1 |
| 8197 | Unidentified gi03c03
| |
|
|
|
|
1 |
| 8198 | Unidentified gi03a02
| |
|
|
|
|
1 |
| 8199 | Unidentified gi02c12
| |
|
|
|
|
1 |
| 8200 | Unidentified gi02b11
| |
|
|
|
|
1 |
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