Potassium voltage-gated channel, shaker-related subfamily, member 1, Mus musculus

Expression Profile:

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Highly represented (1.1 pct) in cDNA library dbEST:18124, RIKEN full-length enriched mouse cDNA library, C57BL/6J pooled tissue 11.

GEO profiles:

Gene expression profiles in the NCBI Gene Expression Omnibus database

cDNA Sources:

brain; mixed; eye; spinal cord; inner ear; bone; bladder; ovary; embryonic tissue; uncharacterized tissue; dorsal root ganglion; mammary gland

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Finding cDNAs

UGID:269662 UniGene Mm.40424 Mus musculus (mouse) Kcna1

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Potassium voltage-gated channel, shaker-related subfamily, member 1 (Kcna1)

SELECTED PROTEIN SIMILARITIES

Comparison of sequences in UniGene with selected protein reference sequences. The alignments can suggest function of a gene.

Reference Protein		Species	Id(%)	Len(aa)
NP_728120.1	Shaker CG12348-PD, isoform D	D. melanogaster	75.1	445
NP_509795.1	EGg Laying defective family member (egl-36)	C. elegans	45.5	413

GENE EXPRESSION

Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.

MAPPING POSITION

Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.

	Chromosome:	6
	Map position:	6 F1-F3\|6 61.0 cM

SEQUENCES

Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (6)

AK039559.1	Mus musculus adult male spinal cord cDNA, RIKEN full-length enriched library, clone:A330062C03 product:potassium voltage-gated channel, shaker-related subfamily, member 1, full insert sequence	P
AK033074.1	Mus musculus adult male corpus striatum cDNA, RIKEN full-length enriched library, clone:7630403E16 product:unclassifiable, full insert sequence
AK158065.1	Mus musculus adult inner ear cDNA, RIKEN full-length enriched library, clone:F930023P06 product:potassium voltage-gated channel, shaker-related subfamily, member 1, full insert sequence	P
BC112970.2	Mus musculus potassium voltage-gated channel, shaker-related subfamily, member 1, mRNA (cDNA clone MGC:124402 IMAGE:40048563), complete cds	P
Y00305.1	Mouse MBK1 mRNA for mouse brain potassium channel protein-1	P
NM_010595.3	Mus musculus potassium voltage-gated channel, shaker-related subfamily, member 1 (Kcna1), mRNA

EST sequences (10 of 474) [Show all sequences]

BY232163.1	Clone F930023P06	inner ear	5' read
BY232555.1	Clone F930026D15	inner ear	5' read
BY233493.1	Clone F930030M15	inner ear	5' read
BY233962.1	Clone F930032P07	inner ear	5' read
BY237453.1	Clone K230001O17	brain	5' read
BY238022.1	Clone K230004M13	brain	5' read
BY242215.1	Clone K230033C10	brain	5' read
BY242305.1	Clone K230033K20	brain	5' read
BY251341.1	Clone K230338I02	brain	5' read
BY251887.1	Clone K230341C23	brain	5' read

Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria