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UGID:2007725     UniGene Mm.397111     Mus musculus (mouse)   Pafah1b1 Order cDNA clone, Links
Platelet-activating factor acetylhydrolase, isoform 1b, beta1 subunit (Pafah1b1)
SELECTED PROTEIN SIMILARITIES
Comparison of sequences in UniGene with selected protein reference sequences. The alignments can suggest function of a gene.
Reference ProteinSpeciesId(%)Len(aa)
XP_001508425.1 PREDICTED: similar to platelet-activating factor acetylhydrolase 45K chain - bovine O. anatinus 100.0 409
NP_788373.1 Lissencephaly-1 CG8440-PE, isoform E D. melanogaster 74.6 409

GENE EXPRESSION
Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.
Expression Profile: View expression levels using UniGene's EST ProfileViewer
[Show more entries with profiles like this]
GEO profiles: Gene expression profiles in the NCBI Gene Expression Omnibus database
cDNA Sources: embryonic tissue; brain; mammary gland; mixed; eye; uncharacterized tissue; thymus; skin; bone marrow; extraembryonic tissue; pancreas; testis; ovary; kidney; heart; prostate; stomach; intestine; sympathetic ganglion; connective tissue; uterus; bladder; vagina; spinal cord; molar; blood; lung; lymph node; spleen; bone; fertilized ovum; dorsal root ganglion; adipose tissue; tongue; nasopharynx; inner ear; artery
MAPPING POSITION
Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.
Chromosome: 11
Map position: 11 B3|11 44.0 cM
SEQUENCES
Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (31)

AY189218.1 Mus musculus strain C57BL/6 platelet-activating factor acetylhydrolase isoform 1b beta1 subunit (Pafah1b1) mRNA, complete cds P
AY189217.1 Mus musculus strain NOD/LtJ platelet-activating factor acetylhydrolase isoform 1b beta1 subunit (Pafah1b1) mRNA, complete cds P
BC046989.1 Mus musculus cDNA clone IMAGE:6309704, containing frame-shift errors PA
AK198932.1 Mus musculus cDNA, clone:Y1G0129K02, strand:minus, reference:ENSEMBL:Mouse-Transcript-ENST:ENSMUST00000021091, based on BLAT search
BC099462.1 Mus musculus cDNA clone IMAGE:30787714, containing frame-shift errors PA
AK168960.1 Mus musculus 17 days embryo stomach cDNA, RIKEN full-length enriched library, clone:I920067M01 product:platelet-activating factor acetylhydrolase, isoform 1b, beta1 subunit, full insert sequence P
AK168929.1 Mus musculus 17 days pregnant adult female amnion cDNA, RIKEN full-length enriched library, clone:I920065J17 product:platelet-activating factor acetylhydrolase, isoform 1b, beta1 subunit, full insert sequence P
AK164276.1 Mus musculus 9 days embryo whole body cDNA, RIKEN full-length enriched library, clone:D030062B19 product:platelet-activating factor acetylhydrolase, isoform 1b, beta1 subunit, full insert sequence
AK152284.1 Mus musculus bone marrow macrophage cDNA, RIKEN full-length enriched library, clone:I830058J11 product:platelet-activating factor acetylhydrolase, isoform 1b, beta1 subunit, full insert sequence
AK164008.1 Mus musculus 7 days embryo whole body cDNA, RIKEN full-length enriched library, clone:C430004P20 product:platelet-activating factor acetylhydrolase, isoform 1b, beta1 subunit, full insert sequence P
AK167824.1 Mus musculus CRL-1722 L5178Y-R cDNA, RIKEN full-length enriched library, clone:I730030N07 product:platelet-activating factor acetylhydrolase, isoform 1b, beta1 subunit, full insert sequence P
AK163673.1 Mus musculus 10 days neonate cerebellum cDNA, RIKEN full-length enriched library, clone:B930005H23 product:hypothetical protein, full insert sequence
AK144908.1 Mus musculus mammary gland RCB-0526 Jyg-MC(A) cDNA, RIKEN full-length enriched library, clone:G830001I03 product:platelet-activating factor acetylhydrolase, isoform 1b, beta1 subunit, full insert sequence P
AK167448.1 Mus musculus 15 days pregnant adult female placenta cDNA, RIKEN full-length enriched library, clone:I530014H11 product:platelet-activating factor acetylhydrolase, isoform 1b, beta1 subunit, full insert sequence P
AK147793.1 Mus musculus melanocyte cDNA, RIKEN full-length enriched library, clone:G270041F19 product:platelet-activating factor acetylhydrolase, isoform 1b, beta1 subunit, full insert sequence P
AK162339.1 Mus musculus adult male cecum cDNA, RIKEN full-length enriched library, clone:9130413D22 product:platelet-activating factor acetylhydrolase, isoform 1b, beta1 subunit, full insert sequence
AK147533.1 Mus musculus adult male brain UNDEFINED_CELL_LINE cDNA, RIKEN full-length enriched library, clone:M5C1065P12 product:platelet-activating factor acetylhydrolase, isoform 1b, beta1 subunit, full insert sequence P
AK147515.1 Mus musculus adult male brain UNDEFINED_CELL_LINE cDNA, RIKEN full-length enriched library, clone:M5C1058P04 product:platelet-activating factor acetylhydrolase, isoform 1b, beta1 subunit, full insert sequence P
AK147507.1 Mus musculus cDNA, RIKEN full-length enriched library, clone:M5C1056I19 product:platelet-activating factor acetylhydrolase, isoform 1b, beta1 subunit, full insert sequence P
AK147309.1 Mus musculus adult male brain UNDEFINED_CELL_LINE cDNA, RIKEN full-length enriched library, clone:M5C1011O16 product:platelet-activating factor acetylhydrolase, isoform 1b, beta1 subunit, full insert sequence P
AK147237.1 Mus musculus adult male brain UNDEFINED_CELL_LINE cDNA, RIKEN full-length enriched library, clone:M5C1000K16 product:platelet-activating factor acetylhydrolase, isoform 1b, beta1 subunit, full insert sequence P
AK147229.1 Mus musculus cDNA, RIKEN full-length enriched library, clone:M421028C14 product:platelet-activating factor acetylhydrolase, isoform 1b, beta1 subunit, full insert sequence P
AK147207.1 Mus musculus 11 days embryo whole body cDNA, RIKEN full-length enriched library, clone:M421002E13 product:platelet-activating factor acetylhydrolase, isoform 1b, beta1 subunit, full insert sequence P
AK161751.1 Mus musculus adult male thymus cDNA, RIKEN full-length enriched library, clone:5830450M22 product:platelet-activating factor acetylhydrolase, isoform 1b, beta1 subunit, full insert sequence
AK160764.1 Mus musculus 13 days embryo head cDNA, RIKEN full-length enriched library, clone:3110063A04 product:platelet-activating factor acetylhydrolase, isoform 1b, beta1 subunit, full insert sequence P
L25108.1 Mouse LIS mRNA P
L25109.1 Mus musculus LIS mRNA, partial cds P
U95116.1 Mus musculus lissencephaly-1 protein (LIS-1) mRNA, complete cds PA
NM_013625.2 Mus musculus platelet-activating factor acetylhydrolase, isoform 1b, beta1 subunit (Pafah1b1), mRNA A
BC014831.1 Mus musculus platelet-activating factor acetylhydrolase, isoform 1b, beta1 subunit, mRNA (cDNA clone MGC:25297 IMAGE:4507474), complete cds PA
BC026141.1 Mus musculus platelet-activating factor acetylhydrolase, isoform 1b, beta1 subunit, mRNA (cDNA clone MGC:13913 IMAGE:4017963), complete cds PA

EST sequences (10 of 663) [Show all sequences]

CA572957.1 Clone NIA:K0542H12_IMAGE:30067967 bone marrow 5' read
CA574063.1 Clone NIA:K0609F10_IMAGE:30069669 bone marrow 5' read P
CA749355.1 Clone IMAGE:6831401 brain 5' read P
CA752197.1 Clone IMAGE:6830618 brain 5' read PM
CA773010.1 pancreas 5' read P
BY034850.1 Clone I530015J05 mixed 5' read
BY036366.1 Clone I530024C11 extraembryonic tissue 5' read
BY041585.1 Clone I730019N05 mixed 5' read P
BY062775.1 Clone I920024G01 heart 5' read
BY069247.1 Clone I920065J17 extraembryonic tissue 5' read


Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria

 
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