NCBI UniGene banner graphic
PubMed Nucleotide Protein Genome Structure Popset Taxonomy
 Search
NCBI

UniGene
Homepage
FAQs
Query Tips
Library Browser
DDD
Download UniGene

Related Databases
Gene
HomoloGene
dbEST
Trace Archive

NIH cDNA Projects
MGC | ZGC | XGC
Finding cDNAs
UGID:258777     UniGene Mm.8983     Mus musculus (mouse)   Tnfsf12 Order cDNA clone, Links
Tumor necrosis factor (ligand) superfamily, member 13 (Tnfsf12)
SELECTED PROTEIN SIMILARITIES
Comparison of sequences in UniGene with selected protein reference sequences. The alignments can suggest function of a gene.
Reference ProteinSpeciesId(%)Len(aa)
XP_001171471.1 PREDICTED: tumor necrosis factor ligand superfamily, member 13 isoform 4 P. troglodytes 85.4 238
NP_742085.1 tumor necrosis factor ligand superfamily, member 13 isoform gamma proprotein H. sapiens 84.9 238

GENE EXPRESSION
Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.
Expression Profile: View expression levels using UniGene's EST ProfileViewer
[Show more entries with profiles like this]
GEO profiles: Gene expression profiles in the NCBI Gene Expression Omnibus database
cDNA Sources: mammary gland; eye; intestine; stomach; uncharacterized tissue; brain; mixed; embryonic tissue; bone marrow; spleen; thymus; heart; muscle; uterus; tongue; kidney; oviduct; ovary; lung; pancreas; liver; bone; testis; inner ear
MAPPING POSITION
Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.
Chromosome: 11
SEQUENCES
Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (15)

AK044387.1 Mus musculus adult retina cDNA, RIKEN full-length enriched library, clone:A930010H24 product:tumor necrosis factor (ligand) superfamily, member 12., full insert sequence P
AK040667.1 Mus musculus adult male aorta and vein cDNA, RIKEN full-length enriched library, clone:A530010M09 product:tumor necrosis factor (ligand) superfamily, member 13, full insert sequence P
NM_011614.1 Mus musculus tumor necrosis factor (ligand) superfamily, member 12 (Tnfsf12), mRNA
BC069900.1 Mus musculus tumor necrosis factor (ligand) superfamily, member 13, mRNA (cDNA clone MGC:78131 IMAGE:5290965), complete cds PA
BC096441.1 Mus musculus tumor necrosis factor (ligand) superfamily, member 12-member 13, mRNA (cDNA clone MGC:106105 IMAGE:3482756), complete cds PA
AK171014.1 Mus musculus NOD-derived CD11c +ve dendritic cells cDNA, RIKEN full-length enriched library, clone:F630218H03 product:tumor necrosis factor (ligand) superfamily, member 12, full insert sequence
AK170351.1 Mus musculus NOD-derived CD11c +ve dendritic cells cDNA, RIKEN full-length enriched library, clone:F630050H12 product:tumor necrosis factor (ligand) superfamily, member 13, full insert sequence P
AK170297.1 Mus musculus NOD-derived CD11c +ve dendritic cells cDNA, RIKEN full-length enriched library, clone:F630043A10 product:tumor necrosis factor (ligand) superfamily, member 12, full insert sequence
AK134028.1 Mus musculus adult male thymus cDNA, RIKEN full-length enriched library, clone:5830411O11 product:tumor necrosis factor (ligand) superfamily, member 13, full insert sequence P
NM_001034097.1 Mus musculus tumor necrosis factor (ligand) superfamily, member 12-member 13 (Tnfsf12-tnfsf13), transcript variant 1, mRNA P
NM_001034098.1 Mus musculus tumor necrosis factor (ligand) superfamily, member 12-member 13 (Tnfsf12-tnfsf13), transcript variant 2, mRNA P
AF030100.2 Mus musculus TWEAK mRNA, complete cds
AK020909.1 Mus musculus adult retina cDNA, RIKEN full-length enriched library, clone:A930030D13 product:tumor necrosis factor (ligand) superfamily, member 12, full insert sequence
AK009514.1 Mus musculus adult male tongue cDNA, RIKEN full-length enriched library, clone:2310026N09 product:tumor necrosis factor (ligand) superfamily, member 13, full insert sequence P
NM_023517.2 Mus musculus tumor necrosis factor (ligand) superfamily, member 13 (Tnfsf13), mRNA P

EST sequences (10 of 124) [Show all sequences]

BY024285.1 Clone G930022E18 mammary gland 5' read
BY081370.1 Clone K630031L10 mixed 5' read
BY102487.1 Clone K630145E21 mixed 5' read
BY102888.1 Clone K630148F03 stomach 5' read
BY175389.1 Clone F630011N20 uncharacterized tissue 5' read
BY182135.1 Clone F630050H12 uncharacterized tissue 5' read
BY368515.1 Clone F430107J21 spleen 3' read A
BY463961.1 Clone K630148F03 stomach 3' read A
BY503520.1 Clone I830081M22 bone marrow 3' read
BY524966.1 Clone F630043A10 uncharacterized tissue 3' read


Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria

 
NLM | NIH | UniGene | Privacy Statement | Disclaimer | NCBI Help