NbLib0053: NIDCD mouse organ of corti unnormalized (gi)
Last GRIST date: 03/20/2008
Related Publication: Gene expression profile of the mouse organ of Corti at the onset of hearing. Pompeia C, Hurle B, Belyantseva IA, Noben-Trauth K, Beisel K, Gao J, Buchoff P, Wistow G, Kachar B. Genomics. 2004. Jun;83(6):1000-11. View Publication
EST analysis of gene expression in the mouse organ of Corti at the onset of hearing
In order to study the transcriptional repertoire of the organ of Corti during the onset of hearing, a database of expressed sequence tags (EST) is being generated from in depth sequencing of a non-amplified mouse organ of Corti cDNA library. Inserts of cDNA clones were sequenced, analyzed and clustered using specially written software (NEIBank, http://neibank.nei.nih.gov). A preliminary collection of ESTs with description and human chromosomal location is presented as a web-based resource for public access. A paper with detailed description of the library and detailed analysis of the repertoire of genes expressed will soon be made available (Kachar et al., in preparation).
View Organ of Corti library comparison table: UniGene identifiers were used to compare the OC library with several other quantitative libraries. The values express the frequency of gene expression. Reference UniGene library identifiers are shown preceding the tissue from which the library was made.
| Group# | Description |
Entrez Gene Id | GenBank | UniGene (Build Mm #175) |
Chromosomal Pos. (BLAT) | Chromosome (UniGene) | Num. Clones |
|---|
| 8001 | Unidentified gi80b03
| |
|
|
|
|
1 |
| 8002 | Unidentified gi80a11
| |
|
|
|
|
1 |
| 8003 | Unidentified gi80a07
| |
|
|
|
|
1 |
| 8004 | Unidentified gi79g09
| |
|
|
|
|
1 |
| 8005 | Unidentified gi79e03
| |
|
|
|
|
1 |
| 8006 | Unidentified gi79a05
| |
|
|
|
|
1 |
| 8007 | Unidentified gi78h03
| |
|
|
|
|
1 |
| 8008 | Unidentified gi78g06
| |
|
|
|
|
1 |
| 8009 | Unidentified gi78c09
| |
|
|
|
|
1 |
| 8010 | Unidentified gi78b03
| |
|
|
|
|
1 |
| 8011 | Unidentified gi78a08
| |
|
|
|
|
1 |
| 8012 | Unidentified gi78a07
| |
|
|
|
|
1 |
| 8013 | Unidentified gi77f11
| |
|
|
|
|
1 |
| 8014 | Unidentified gi77e12
| |
|
|
|
|
1 |
| 8015 | Unidentified gi77e10
| |
|
|
|
|
1 |
| 8016 | Unidentified gi77b08
| |
|
|
|
|
1 |
| 8017 | Unidentified gi77a12
| |
|
|
|
|
1 |
| 8018 | Unidentified gi77a09
| |
|
|
|
|
1 |
| 8019 | Unidentified gi76g05
| |
|
|
|
|
1 |
| 8020 | Unidentified gi76f10
| |
|
|
|
|
1 |
| 8021 | Unidentified gi76f04
| |
|
|
|
|
1 |
| 8022 | Unidentified gi76f01
| |
|
|
|
|
1 |
| 8023 | Unidentified gi76e11
| |
|
|
|
|
1 |
| 8024 | Unidentified gi76d03
| |
|
|
|
|
1 |
| 8025 | Unidentified gi76b03
| |
|
|
|
|
1 |
| 8026 | 88% protein similarity to: ribosomal protein S6 [synthetic construct]
| |
|
|
|
|
1 |
| 8027 | Unidentified gi75e09
| |
|
|
|
|
1 |
| 8028 | Unidentified gi75e04
| |
|
|
|
|
1 |
| 8029 | Unidentified gi75b12
| |
|
|
|
|
1 |
| 8030 | Unidentified gi75b04
| |
|
|
|
|
1 |
| 8031 | Unidentified gi75b01
| |
|
|
|
|
1 |
| 8032 | Unidentified gi74g06
| |
|
|
|
|
1 |
| 8033 | Unidentified gi74d10
| |
|
|
|
|
1 |
| 8034 | Unidentified gi22g09
| |
|
|
|
|
1 |
| 8035 | Unidentified gi22f09
| |
|
|
|
|
1 |
| 8036 | Unidentified gi21h06
| |
|
|
|
|
1 |
| 8037 | Unidentified gi21g12
| |
|
|
|
|
1 |
| 8038 | Unidentified gi21e12
| |
|
|
|
|
1 |
| 8039 | 85% protein similarity to: TNF receptor-associated factor 7 [Gallus gallus]
| |
|
|
|
|
1 |
| 8040 | Unidentified gi21e04
| |
|
|
|
|
1 |
| 8041 | 84% protein similarity to: transaldolase 1 [Mus musculus]
| |
|
|
|
|
1 |
| 8042 | Unidentified gi21d10
| |
|
|
|
|
1 |
| 8043 | Unidentified gi21d01
| |
|
|
|
|
1 |
| 8044 | Unidentified gi21c09
| |
|
|
|
|
1 |
| 8045 | Unidentified gi21c02
| |
|
|
|
|
1 |
| 8046 | Unidentified gi21b11
| |
|
|
|
|
1 |
| 8047 | Unidentified gi21a05
| |
|
|
|
|
1 |
| 8048 | Unidentified gi21a01
| |
|
|
|
|
1 |
| 8049 | Unidentified gi20g08
| |
|
|
|
|
1 |
| 8050 | Unidentified gi20d08
| |
|
|
|
|
1 |
| 8051 | Unidentified gi20a11
| |
|
|
|
|
1 |
| 8052 | Unidentified gi19g07
| |
|
|
|
|
1 |
| 8053 | Unidentified gi19f05
| |
|
|
|
|
1 |
| 8054 | Unidentified gi19f01
| |
|
|
|
|
1 |
| 8055 | 84% protein similarity to: beta actin [Cynops ensicauda]
| |
|
|
|
|
1 |
| 8056 | Unidentified gi19b12
| |
|
|
|
|
1 |
| 8057 | Unidentified gi19a07
| |
|
|
|
|
1 |
| 8058 | Unidentified gi18g09
| |
|
|
|
|
1 |
| 8059 | Unidentified gi18f09
| |
|
|
|
|
1 |
| 8060 | 85% protein similarity to: YWHAZ protein [Homo sapiens]
| |
|
|
|
|
1 |
| 8061 | Unidentified gi17g09
| |
|
|
|
|
1 |
| 8062 | Unidentified gi17g05
| |
|
|
|
|
1 |
| 8063 | Unidentified gi17f07
| |
|
|
|
|
1 |
| 8064 | Unidentified gi17e06
| |
|
|
|
|
1 |
| 8065 | Unidentified gi17b09
| |
|
|
|
|
1 |
| 8066 | Unidentified gi17b02
| |
|
|
|
|
1 |
| 8067 | Unidentified gi16h11
| |
|
|
|
|
1 |
| 8068 | Unidentified gi16h02
| |
|
|
|
|
1 |
| 8069 | Unidentified gi16f08
| |
|
|
|
|
1 |
| 8070 | Unidentified gi16d09
| |
|
|
|
|
1 |
| 8071 | Unidentified gi16c06
| |
|
|
|
|
1 |
| 8072 | Unidentified gi16c03
| |
|
|
|
|
1 |
| 8073 | 96% protein similarity to: unnamed protein product [Mus musculus]
| |
|
|
|
|
1 |
| 8074 | Unidentified gi15h09
| |
|
|
|
|
1 |
| 8075 | Unidentified gi15h06
| |
|
|
|
|
1 |
| 8076 | Unidentified gi15h04
| |
|
|
|
|
1 |
| 8077 | Unidentified gi15g08
| |
|
|
|
|
1 |
| 8078 | Unidentified gi15f09
| |
|
|
|
|
1 |
| 8079 | Unidentified gi15d09
| |
|
|
|
|
1 |
| 8080 | Unidentified gi15b06
| |
|
|
|
|
1 |
| 8081 | Unidentified gi15a12
| |
|
|
|
|
1 |
| 8082 | Unidentified gi15a05
| |
|
|
|
|
1 |
| 8083 | 57% protein similarity to: ECHDC2 protein [Homo sapiens]
| |
|
|
|
|
1 |
| 8084 | Unidentified gi14e12
| |
|
|
|
|
1 |
| 8085 | Unidentified gi14d08
| |
|
|
|
|
1 |
| 8086 | Unidentified gi14c06
| |
|
|
|
|
1 |
| 8087 | Unidentified gi14b07
| |
|
|
|
|
1 |
| 8088 | Unidentified gi13h03
| |
|
|
|
|
1 |
| 8089 | Unidentified gi13g01
| |
|
|
|
|
1 |
| 8090 | 90% protein similarity to: VEPH isoform A [Mus musculus]
| |
|
|
|
|
1 |
| 8091 | Unidentified gi13e11
| |
|
|
|
|
1 |
| 8092 | Unidentified gi13d05
| |
|
|
|
|
1 |
| 8093 | Unidentified gi13d04
| |
|
|
|
|
1 |
| 8094 | 88% protein similarity to: unnamed protein product [Mus musculus]
| |
|
|
|
|
1 |
| 8095 | Unidentified gi13c04
| |
|
|
|
|
1 |
| 8096 | Unidentified gi13a05
| |
|
|
|
|
1 |
| 8097 | Unidentified gi12f05
| |
|
|
|
|
1 |
| 8098 | Unidentified gi29b08
| |
|
|
|
|
1 |
| 8099 | Unidentified gi29a07
| |
|
|
|
|
1 |
| 8100 | Unidentified gi28h11
| |
|
|
|
|
1 |
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