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Finding cDNAs
UGID:258716     UniGene Mm.8256     Mus musculus (mouse)   Khdrbs1 Order cDNA clone, Links
KH domain containing, RNA binding, signal transduction associated 1 (Khdrbs1)
SELECTED PROTEIN SIMILARITIES
Comparison of sequences in UniGene with selected protein reference sequences. The alignments can suggest function of a gene.
Reference ProteinSpeciesId(%)Len(aa)
XP_544442.2 PREDICTED: similar to KH domain containing, RNA binding, signal transduction associated 1 isoform 1 C. lupus familiaris 95.6 382
NP_523810.2 quaking related 58E-2 CG5821-PA D. melanogaster 53.3 199
NP_996736.1 quaking homolog, KH domain RNA binding isoform HQK-7 H. sapiens 49.5 289

GENE EXPRESSION
Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.
Expression Profile: View expression levels using UniGene's EST ProfileViewer
[Show more entries with profiles like this]
GEO profiles: Gene expression profiles in the NCBI Gene Expression Omnibus database
cDNA Sources: embryonic tissue; mammary gland; brain; eye; thymus; bone marrow; spleen; skin; mixed; intestine; pancreas; testis; pituitary gland; kidney; sympathetic ganglion; heart; molar; prostate; lymph node; ovary; tongue; lung; inner ear; extraembryonic tissue; spinal cord; fertilized ovum; stomach; olfactory mucosa; thyroid; liver; epididymis; dorsal root ganglion; bone; uncharacterized tissue; salivary gland; nasopharynx; connective tissue; muscle
MAPPING POSITION
Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.
Chromosome: 4
Map position: 4 D2.2
SEQUENCES
Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (12)

AK044927.1 Mus musculus 9.5 days embryo parthenogenote cDNA, RIKEN full-length enriched library, clone:B130012H23 product:src associated in mitosis, 68 kDa, full insert sequence P
AK037411.1 Mus musculus 16 days neonate thymus cDNA, RIKEN full-length enriched library, clone:A130015L03 product:src associated in mitosis, 68 kDa, full insert sequence
AK204780.1 Mus musculus cDNA, clone:Y1G0149J16, strand:minus, reference:ENSEMBL:Mouse-Transcript-ENST:ENSMUST00000066257, based on BLAT search P
AK199670.1 Mus musculus cDNA, clone:Y1G0132A12, strand:minus, reference:ENSEMBL:Mouse-Transcript-ENST:ENSMUST00000066257, based on BLAT search P
AK152084.1 Mus musculus bone marrow macrophage cDNA, RIKEN full-length enriched library, clone:I830047F14 product:KH domain containing, RNA binding, signal transduction associated 1, full insert sequence P
AK137122.1 Mus musculus 12 days embryo embryonic body between diaphragm region and neck cDNA, RIKEN full-length enriched library, clone:9430090E05 product:KH domain containing, RNA binding, signal transduction associated 1, full insert sequence P
AK150687.1 Mus musculus bone marrow macrophage cDNA, RIKEN full-length enriched library, clone:I830013L03 product:KH domain containing, RNA binding, signal transduction associated 1, full insert sequence P
AK146815.1 Mus musculus 17 days embryo heart cDNA, RIKEN full-length enriched library, clone:I920061D13 product:KH domain containing, RNA binding, signal transduction associated 1, full insert sequence P
U17046.1 Mus musculus p62 ras-GAP associated phosphoprotein mRNA, complete cds P
U17961.1 Mus musculus p62 mRNA, complete cds PA
NM_011317.3 Mus musculus KH domain containing, RNA binding, signal transduction associated 1 (Khdrbs1), mRNA P
BC002051.1 Mus musculus KH domain containing, RNA binding, signal transduction associated 1, mRNA (cDNA clone MGC:6063 IMAGE:3490667), complete cds PA

EST sequences (10 of 541) [Show all sequences]

CA569197.1 Clone NIA:K0439B09_IMAGE:30062804 bone marrow 5' read P
BY021996.1 Clone G830050H06 mammary gland 5' read
BY022780.1 Clone G930013M08 mammary gland 5' read
BY041526.1 Clone I730019K05 spleen 5' read P
BY057798.1 Clone I730093P16 mixed 5' read
BY059328.1 Clone I730099N01 mixed 5' read P
BY075970.1 Clone I920109M21 extraembryonic tissue 5' read
BY110607.1 Clone L330038J23 embryonic tissue 5' read
BY144587.1 Clone L930191H01 embryonic tissue 5' read
BY144942.1 Clone L930197C20 embryonic tissue 5' read


Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria

 
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