NbLib0133: NEI guinea pig whole eye unnormalized (naz,nba,nbb)

Last GRIST date: 07/17/2008

View this library: Full List | Indexed by Chromosome | Indexed by GO Term | Tab Delimited Understanding NEIBank Data
[**] This UniGene associated with another RefSeq or GenBank in this table. Click to display. View All Data | << Previous Page | Next Page >>
Group#Description Entrez Gene IdGenBankUniGene (Build Mm #175) Chromosomal Pos. (BLAT)ChromosomeNum. Clones
1
  • Cavia porcellus alphaA-crystallin (Cryaa) mRNA, complete cds
  •   DQ903937     scaffold_90:3000047
      464
    2
  • C.porcellus zeta-crystallin mRNA, complete cds
  •   M26936     scaffold_2:60331972
      330
    3
  • Cavia porcellus gammaS-crystallin (Crygs) mRNA, complete cds
  •   DQ903939     scaffold_7:51560696
      182
    4
  • Cavia porcellus betaB2-crystallin (Crybb2) mRNA, complete cds
  •   EF457998     scaffold_4:17403200
      113
    5
  • Cavia porcellus gammaB-crystallin (Crygb) mRNA, complete cds
  •   EF426307     scaffold_13:41607532
      108
    6
  • Cavia porcellus betaA4-crystallin (Cryba4) mRNA, complete cds
  •   EF666994     scaffold_4:16274697
      108
    7
  • Cavia porcellus mRNA for beta A3-crystallin and beta A1-crystallin
  •   AJ306650     scaffold_32:23258893
      98
    8
  • Cavia porcellus rhodopsin (Rho) mRNA, complete cds
  •   EF457995     scaffold_109:2847147
      72
    9
  • Cavia porcellus gammaC-crystallin (Crygc) mRNA, complete cds
  •   EF426306     scaffold_13:41605866
      64
    10
  • Cavia porcellus betaB3-crystallin (Crybb3) mRNA, complete cds
  •   EF457997     scaffold_4:17380590
      62
    11
  • Cavia porcellus betaB1-crystallin (Crybb1) mRNA, complete cds
  •   EF666993     scaffold_4:16284733
      45
    12
  • Cavia porcellus beta-transducin (Gnb1) mRNA, complete cds
  •   EU257501     scaffold_186:761029
      38
    13
  • 100% protein similarity to: PREDICTED: similar to elongation factor 1 alpha isoform 2 [Monodelphis domestica]
  •       scaffold_39:16953489
    scaffold_4:46684569
      36
    14
  • Cavia porcellus mRNA for glyceraldehyde 3-phosphate dehydrogenase, partial cds
  •   AB060340     scaffold_107:692544
    scaffold_98:2234755
      34
    15
  • Cavia porcellus S-antigen (Sag) mRNA, complete cds
  •   EF457996     scaffold_13:28673000
      27
    16
  • 96% protein similarity to: ALDOC protein [Homo sapiens]
  •       scaffold_15:34458043
    scaffold_32:23888497
      27
    17
  • Cavia porcellus lengsin mRNA, complete cds
  •   DQ324462     scaffold_0:82817490
      26
    18
  • Cavia porcellus gammaA-crystallin (Cryga) mRNA, complete cds
  •   EF457999     scaffold_13:41620483
      22
    19
  • Cavia porcellus phakinin (BFSP2) mRNA, complete cds
  •   EU257503     scaffold_8:30599385
      22
    20
  • Cavia porcellus Carbonic anhydrase 3 (CA3) mRNA, complete cds
  •   EU327786     scaffold_0:28693406
      21
    21
  • 94% protein similarity to: dermatan sulfate proteoglycan II [Equus caballus]
  •       scaffold_9:9853801
      21
    22
  • Cavia porcellus major intrinsic protein (MIP) mRNA, complete cds
  •   EU327787     scaffold_9:41747535
      19
    23
  • Cavia porcellus GRIFIN mRNA, complete cds
  •   EU259197     scaffold_30:7852906
      18
    24
  • Cavia porcellus alpha-enolase (Eno1) mRNA, complete cds
  •   EU306867     scaffold_25:24437458
      17
    25
  • Cavia porcellus alphaB-crystallin (Cryab) mRNA, complete cds
  •   EU252027     scaffold_19:35866050
      17
    26
  • Cavia porcellus betaA2-crystallin (Cryba2) mRNA, complete cds
  •   EF666995     scaffold_89:6184898
      14
    27
  • 71% protein similarity to: beaded filament structural protein 1 [Rattus norvegicus]
  •       scaffold_8:8709494
      14
    28
  • Cavia porcellus ferritin light chain mRNA, complete cds
  •   AF233445     scaffold_18:26161809
    scaffold_70:8357705
      13
    29
  • Cavia porcellus alpha-transducin (Gnat1) mRNA, complete cds
  •   EU257502     scaffold_8:25226963
      13
    30
  • PREDICTED: Canis familiaris ribosomal protein, large, P0, transcript variant 3 (RPLP0), mRNA
  • 403645
    XM_852951     scaffold_4:5346693
      13
    31
  • PREDICTED: Rattus norvegicus similar to tubulin, alpha 1 (LOC499494), mRNA
  • 499494
    XR_006181     scaffold_9:50436458
      12
    32
  • Cavia porcellus TPT1 (TPT1) mRNA, complete cds
  •   EU330893     scaffold_6:55557050
      12
    33
  • 91% protein similarity to: Phosducin (PHD) (33 kDa phototransducing protein)
  •       scaffold_12:34427407
      12
    34
  • 97% protein similarity to: vimentin [Bos taurus]
  •       scaffold_120:1620930
      12
    35
  • 95% protein similarity to: Creatine kinase B-type (Creatine kinase B chain) (B-CK)
  •       scaffold_111:3086721
      12
    36
  • Cavia porcellus cytoplasmic actin mRNA, partial cds
  •   AF191277     scaffold_76:6016055
      11
    37
  • Bos taurus Y box binding protein 1 (YBX1), mRNA
  • 287023
    NM_174815     scaffold_133:1964160
      11
    38
  • Cavia porcellus leucine zipper transcription factor (NRL) mRNA, complete cds
  •   EU477759     scaffold_13:16749200
      11
    39
  • 96% protein similarity to: Chain A, Crystal Structure Of Apo Glutamine Synthetase From Dog ( Canis Familiaris)
  •       scaffold_12:2500432
      11
    40
  • 100% protein similarity to: ribosomal protein L4 variant [Homo sapiens]
  •       scaffold_101:832635
      11
    41
  • 74% protein similarity to: keratin 12 [Homo sapiens]
  •       scaffold_53:11096026
      11
    42
  • Cavia porcellus violet-sensitive visual pigment (SWS1) mRNA, complete cds
  •   AY552608     scaffold_11:49246906
      10
    43
  • Guinea pig mRNA for lipocortin-like protein 39K
  •   X14635     scaffold_21:24550176
      10
    44
  • 100% protein similarity to: ribosomal protein L10 [Rattus norvegicus]
  •       scaffold_148:1552129
      10
    45
  • 72% protein similarity to: Prostaglandin-H2 D-isomerase precursor (Lipocalin-type prostaglandin-D synthase) (Glutathione-independent PGD synthetase) (Prostaglandin-D2 synthase) (PGD2 synthase) (PGDS2) (PGDS)
  •       scaffold_18:38334366
      10
    46
  • 100% protein similarity to: Chain A, Crystal Structure Of Bovine Hsc70 (1-394aa)in The Apo State
  •       scaffold_19:25400845
      10
    47
  • Cavia cobaya mRNA for ubiquitin, complete cds
  •   D83208     scaffold_178:1203660
      9
    48
  • Cavia porcellus beta actin mRNA, complete cds
  •   AF508792     scaffold_30:10929898
      9
    49
  • Cavia porcellus E-FABP (FABP5) mRNA, complete cds
  •   EU264005     scaffold_0:32608416
      9
    50
  • 97% protein similarity to: Apolipoprotein E precursor (Apo-E)
  •       scaffold_80:5357602
      9
    51
  • 100% protein similarity to: H3 histone, family 3A [Homo sapiens]
  •       scaffold_193:313663
      9
    52
  • 95% protein similarity to: Homo sapiens cyclin G1 [synthetic construct]
  •       scaffold_17:9982553
      9
    53
  • 91% protein similarity to: heat shock protein [Aedes aegypti]
  •       scaffold_111:2225393
    scaffold_6:343334
      9
    54
  • PREDICTED: Canis familiaris similar to eukaryotic translation initiation factor 4A2, transcript variant 3 (LOC488118), mRNA
  • 488118
    XM_855263     scaffold_209:188331
    scaffold_7:51727958
      8
    55
  • PREDICTED: Canis familiaris similar to ribosomal protein S3a, transcript variant 3 (LOC608748), mRNA
  • 608748
    XM_859142     scaffold_7:28470960
      8
    56
  • 96% protein similarity to: testis enhanced gene transcript [Mus musculus]
  •       scaffold_9:49894362
      8
    57
  • 69% protein similarity to: unc-119 homolog [Bos taurus]
  •       scaffold_32:23909252
      8
    58
  • 97% protein similarity to: ribosomal protein L21 [Homo sapiens]
  •       scaffold_1:48587121
    scaffold_6:28978823
    scaffold_62:5651835
      8
    59
  • 79% protein similarity to: Serpin B6
  •       scaffold_38:299552
      8
    60
  • 86% protein similarity to: cytochrome b5 reductase 1 (B5R.1) [Rattus norvegicus]
  •       scaffold_134:1756110
      8
    61
  • 86% protein similarity to: Collagen alpha-2(I) chain precursor (Alpha-2 type I collagen)
  •       scaffold_11:25861169
      8
    62
  • 99% protein similarity to: ribosomal protein L5 variant [Homo sapiens]
  •       scaffold_2:18645555
      8
    63
  • Cavia porcellus mRNA for ferritin heavy chain, complete cds
  •   AB073371     scaffold_65:9448202
      7
    64
  • 92% protein similarity to: dickkopf homolog 3 precursor [Homo sapiens]
  •       scaffold_67:2814959
      7
    65
  • 93% protein similarity to: DEP domain containing 5 isoform 1 (predicted) [Callithrix jacchus]
  •       scaffold_103:274299
      7
    66
  • 97% protein similarity to: transmembrane protein BRI [Homo sapiens]
  •       scaffold_6:58239015
      7
    67
  • 97% protein similarity to: RPL13A protein [Homo sapiens]
  •       scaffold_70:8010495
      7
    68
  • 92% protein similarity to: N-myc downstream regulated gene 1 variant [Homo sapiens]
  •       scaffold_51:3400398
      7
    69
  • 93% protein similarity to: carboxypeptidase E preproprotein [Homo sapiens]
  •       scaffold_1:53289970
      7
    70
  • 79% protein similarity to: Ribosomal protein L14 [Mus musculus]
  •       scaffold_7:43778957
      7
    71
  • 89% protein similarity to: Peripherin-2 (Retinal degeneration slow protein)
  •       scaffold_15:31647511
      7
    72
  • 93% protein similarity to: osteonectin [Capra hircus]
  •       scaffold_81:3932478
      7
    73
  • PREDICTED: Canis familiaris similar to synaptosomal-associated protein 25, transcript variant 5 (LOC477158), mRNA
  • 477158
    XM_854022     scaffold_8:15236213
      6
    74
  • 97% protein similarity to: ATP synthase, H+ transporting, mitochondrial F1 complex, alpha subunit, isoform 1 [Mus musculus]
  •       scaffold_14:19065372
      6
    75
  • 95% protein similarity to: aryl hydrocarbon receptor interacting protein-like 1 [Bos taurus]
  •       scaffold_32:17249810
      6
    76
  • 100% protein similarity to: RPS20 [Sus scrofa]
  •       scaffold_64:1764814
      6
    77
  • 97% protein similarity to: PGK1 [Homo sapiens]
  •       scaffold_26:18362765
      6
    78
  • 100% protein similarity to: Chain A, Crystal Structure Of The Human Laminin Receptor Precursor
  •       scaffold_7:43285063
      6
    79
  • 86% protein similarity to: Retinal dehydrogenase 1 (RalDH1) (RALDH 1) (Aldehyde dehydrogenase family 1 member A1) (Aldehyde dehydrogenase, cytosolic) (ALHDII) (ALDH-E1)
  •       scaffold_21:24174842
      6
    80
  • 76% protein similarity to: Signal transducer CD24 precursor (Small cell lung carcinoma cluster 4 antigen)
  •       scaffold_63:6797444
      6
    81
  • PREDICTED: Macaca mulatta similar to Ornithine decarboxylase antizyme (ODC-Az) (LOC721477), mRNA
  • 721477
    XM_001117645     scaffold_369:299656
      5
    82
  • Cavia porcellus cGMP-phosphodiesterase 6 gamma subunit (cGMP-PDE6 gamma) mRNA, complete cds
  •   AF132929     scaffold_76:6118358
      5
    83
  • Cavia porcellus gammaN-crystallin (Crygn) mRNA, complete cds
  •   EU257500     scaffold_32:1060601
      5
    84
  • apoD=RNA type 38 [guinea pigs, adrenal gland, mRNA, 994 nt]
  •   S79402     scaffold_7:58956033
      5
    85
  • 97% protein similarity to: guanine nucleotide binding protein, alpha transducing 2 [Mus musculus]
  •       scaffold_2:33758885
      5
    86
  • 92% protein similarity to: islet-specific glucose-6-phosphatase-related protein isoform 1 [Homo sapiens]
  •       scaffold_3:20370127
      5
    87
  • 98% protein similarity to: elongation factor 1 gamma [Oryctolagus cuniculus]
  •       scaffold_44:15162202
      5
    88
  • 96% protein similarity to: ribosomal protein S2 [Mus musculus]
  •       scaffold_4:22049117
      5
    89
  • 95% protein similarity to: retinal pigment epithelium-specific protein 65kDa [Bos taurus]
  •       scaffold_2:65515640
      5
    90
  • 79% protein similarity to: EP300 interacting inhibitor of differentiation 1 [Bos taurus]
  •       scaffold_23:27393738
      5
    91
  • 99% protein similarity to: ADP-ribosylation factor 1 [Homo sapiens]
  •       scaffold_6:341699
      5
    92
  • 90% protein similarity to: SLC25A3 protein [Bos taurus]
  •       scaffold_9:3589732
      5
    93
  • 97% protein similarity to: ribosomal protein S4, X-linked X isoform [Homo sapiens]
  •       scaffold_22:1786249
    scaffold_4:2467977
      5
    94
  • 94% protein similarity to: guanylate cyclase activator 1a (retina) [Rattus norvegicus]
  •       scaffold_15:32031012
      5
    95
  • 100% protein similarity to: eukaryotic translation initiation factor 3, subunit 6 48kDa [Bos taurus]
  •       scaffold_0:1025575
      5
    96
  • 100% protein similarity to: Chain C, Complex Of Gs-Alpha With The Catalytic Domains Of Mammalian Adenylyl Cyclase
  •       scaffold_156:1169642
      5
    97
  • 96% protein similarity to: ribosomal protein L3 [Rattus norvegicus]
  •       scaffold_28:23303709
      5
    98
  • 97% protein similarity to: lactate dehydrogenase A [synthetic construct]
  •       scaffold_227:565034
      5
    99
  • 97% protein similarity to: RPL7 protein [Homo sapiens]
  •       scaffold_0:39740022
      5
    100
  • 78% protein similarity to: prosaposin (variant Gaucher disease and variant metachromatic leukodystrophy) [Homo sapiens]
  •       scaffold_15:20958252
      5


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